Detailed information of g19937.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_022787858.1, vacuolar protein sorting-associated protein 52 homolog isoform X2 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5TJF0Vacuolar protein sorting-associated protein 52 homolog OS=Canis lupus familiaris OX=9615 GN=VPS52 PE=3 SV=1
Q8C754Vacuolar protein sorting-associated protein 52 homolog OS=Mus musculus OX=10090 GN=Vps52 PE=1 SV=1
Q8N1B4Vacuolar protein sorting-associated protein 52 homolog OS=Homo sapiens OX=9606 GN=VPS52 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF20655Vps52_CVps52, C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR007258FamilyVps52Interproscan
IPR048361DomainVps52, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14190SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000938Cellular ComponentGARP complexInterproscan
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0007041Biological Processlysosomal transportInterproscan
GO:0019905Molecular Functionsyntaxin bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20298VPS52; vacuolar protein sorting-associated protein 52-Membrane traffickingko04131deepkoala

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