Detailed information of g2.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_127764074.1, ASKHA domain-containing protein [Hwanghaeella grinnelliae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P0DX10Corrinoid activation enzyme RamQ OS=Eubacterium limosum OX=1736 GN=ramQ PE=1 SV=1
P0DX08Methylcorrinoid:tetrahydrofolate methyltransferase OS=Eubacterium limosum OX=1736 GN=mtqA PE=1 SV=1
A6H5Y3Methionine synthase OS=Mus musculus OX=10090 GN=Mtr PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01144CoA_transCoenzyme A transferaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF14574RACo_C_terC-terminal domain of RACo the ASKHA domainFamilyInterproscan
PF17651Raco_middleRACo middle regionFamilyInterproscan
PF17650RACo_linkerRACo linker regionFamilyInterproscan
PF00809Pterin_bindPterin binding enzymeDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF01798NopsnoRNA binding domain, fibrillarinFamilyInterproscan
PF09785Prp31_CPrp31 C terminal domainFamilyInterproscan
PF16017BTB_3BTB/POZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012791Domain3-oxoacid CoA-transferase, subunit BInterproscan
IPR037171Homologous_superfamilyNagB/RpiA transferase-likeInterproscan
IPR004163Binding_siteCoenzyme A transferase binding siteInterproscan
IPR012792Domain3-oxoacid CoA-transferase, subunit AInterproscan
IPR004164Active_siteCoenzyme A transferase active siteInterproscan
IPR004165FamilyCoenzyme A transferase family IInterproscan
IPR014388Family3-oxoacid CoA-transferaseInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR000489DomainPterin-binding domainInterproscan
IPR027980DomainRACo, C-terminalInterproscan
IPR011005Homologous_superfamilyDihydropteroate synthase-like superfamilyInterproscan
IPR041414DomainRACo-like, middle regionInterproscan
IPR040506DomainRACo linker regionInterproscan
IPR042259Homologous_superfamilyRACo-like, middle domain superfamilyInterproscan
IPR052911FamilyCorrinoid activation enzymeInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR044574FamilyATPase ARIP4-likeInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR045260FamilyGuanine nucleotide-exchange factor Sec12-likeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR047147FamilyF-box only protein 5/43Interproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR039739FamilyRING-finger protein MAG2/RNF10Interproscan
IPR002687DomainNop domainInterproscan
IPR012976DomainNOSICInterproscan
IPR036070Homologous_superfamilyNop domain superfamilyInterproscan
IPR042239Homologous_superfamilyNop, C-terminal domainInterproscan
IPR027105FamilyU4/U6 small nuclear ribonucleoprotein Prp31Interproscan
IPR019175DomainPrp31 C-terminalInterproscan
IPR039886FamilyBTBD10/KCTD20Interproscan
IPR039885DomainBTBD10/KCTD20, BTB/POZ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13707KETOACID-COENZYME A TRANSFERASEInterproscan
PTHR33064POL PROTEINInterproscan
PTHR42895IRON-SULFUR CLUSTER-BINDING PROTEIN-RELATEDInterproscan
PTHR45797RAD54-LIKEInterproscan
PTHR23284PROLACTIN REGULATORY ELEMENT BINDING PROTEINInterproscan
PTHR15493F-BOX ONLY PROTEIN 5 AND 43Interproscan
PTHR12983RING FINGER 10 FAMILY MEMBERInterproscan
PTHR13904PRE-MRNA SPLICING FACTOR PRP31Interproscan
PTHR21637BTB/POZ DOMAIN-CONTAINING PROTEIN 10-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008410Molecular FunctionCoA-transferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0008260Molecular Functionsuccinyl-CoA:3-oxo-acid CoA-transferase activityInterproscan
GO:0046950Biological Processobsolete cellular ketone body metabolic processInterproscan
GO:0046952Biological Processketone body catabolic processInterproscan
GO:0042558Biological Processpteridine-containing compound metabolic processInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003400Biological Processregulation of COPII vesicle coatingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0009306Biological Processprotein secretionInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0007088Biological Processregulation of mitotic nuclear divisionInterproscan
GO:0045835Biological Processnegative regulation of meiotic nuclear divisionInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0000244Biological Processspliceosomal tri-snRNP complex assemblyInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005687Cellular ComponentU4 snRNPInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0097526Cellular Componentspliceosomal tri-snRNP complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0042327Biological Processpositive regulation of phosphorylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12844PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31-Valine, leucine and isoleucine degradationko00280deepkoala
Spliceosomeko03041deepkoala

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