Detailed information of g2003.t3 in Acropora digitifera

Genomic Location: chr1Alt:33351366...33355703
NR annotation: XP_044180085.1, LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28-like [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF12770
all species →		CHATCHAT domainDomainInterproscan
PF13176
all species →		TPR_7Tetratricopeptide repeatRepeatInterproscan
PF00515
all species →		TPR_1Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR024983
all species →		DomainCHAT domainInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR052699
all species →		FamilyRegulatory & Mitotic Spindle AssociatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10098
all species →		RAPSYN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g2003.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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