Detailed information of g20092.t1 in Montipora capitata

Genomic Location: Sc0001122:38581...40379
NR annotation: XP_015754748.1, PREDICTED: DNA mismatch repair protein Msh3-like [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P13705DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3
P20585DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4
O65607DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana OX=3702 GN=MSH3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004850 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01624
all species →		MutS_IMutS domain IDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016151
all species →		Homologous_superfamilyDNA mismatch repair protein MutS, N-terminalInterproscan
IPR007695
all species →		DomainDNA mismatch repair protein MutS-like, N-terminalInterproscan

 PANTHER
No PANTHER signature was detected for g20092.t1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006298
all species →		Biological Processmismatch repairInterproscan
GO:0030983
all species →		Molecular Functionmismatched DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g20092.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP