Gene detail

Detailed information of g201.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_047144090.1, septin-6 isoform X3 [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14141	Septin-6 OS=Homo sapiens OX=9606 GN=SEPTIN6 PE=1 SV=4
Q9R1T4	Septin-6 OS=Mus musculus OX=10090 GN=Septin6 PE=1 SV=4
Q3SZN0	Septin-6 OS=Bos taurus OX=9913 GN=SEPTIN6 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000017 (this species only)
Orthogroup (gene family)	OG0000038 (this species only)
Orthogroup (gene family)	OG0000063 (this species only)
Orthogroup (gene family)	OG0000162 (this species only)
Orthogroup (gene family)	OG0000398 (this species only)
Orthogroup (gene family)	OG0000675 (this species only)
Orthogroup (gene family)	OG0001642 (this species only)
Orthogroup (gene family)	OG0006977 (this species only)
Orthogroup (gene family)	OG0007794 (this species only)
Orthogroup (gene family)	OG0008115 (this species only)
Orthogroup (gene family)	OG0059735 (this species only)
Orthogroup (gene family)	OG0080598 (this species only)
Orthogroup (gene family)	OG0171139 (this species only)
Orthogroup (gene family)	OG0171980 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17285 all species →	PRMT5_TIM	PRMT5 TIM barrel domain	Domain	Interproscan
PF00705 all species →	PCNA_N	Proliferating cell nuclear antigen, N-terminal domain	Domain	Interproscan
PF02747 all species →	PCNA_C	Proliferating cell nuclear antigen, C-terminal domain	Domain	Interproscan
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00090 all species →	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF03953 all species →	Tubulin_C	Tubulin C-terminal domain	Domain	Interproscan
PF00091 all species →	Tubulin	Tubulin/FtsZ family, GTPase domain	Domain	Interproscan
PF19236 all species →	ADAMTS_CR_3	ADAMTS cysteine-rich domain	Domain	Interproscan
PF05986 all species →	ADAMTS_spacer1	ADAM-TS Spacer 1	Domain	Interproscan
PF01421 all species →	Reprolysin	Reprolysin (M12B) family zinc metalloprotease	Domain	Interproscan
PF00735 all species →	Septin	Septin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025799 all species →	Family	Protein arginine N-methyltransferase	Interproscan
IPR035247 all species →	Domain	PRMT5, TIM barrel domain	Interproscan
IPR000730 all species →	Family	Proliferating cell nuclear antigen, PCNA	Interproscan
IPR022659 all species →	Conserved_site	Proliferating cell nuclear antigen, PCNA, conserved site	Interproscan
IPR022648 all species →	Domain	Proliferating cell nuclear antigen, PCNA, N-terminal	Interproscan
IPR022649 all species →	Domain	Proliferating cell nuclear antigen, PCNA, C-terminal	Interproscan
IPR046938 all species →	Homologous_superfamily	DNA clamp superfamily	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR050525 all species →	Family	Extracellular Matrix Assembly and Organization	Interproscan
IPR036383 all species →	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR000884 all species →	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR052065 all species →	Family	Complement and asymmetry regulator	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR036525 all species →	Homologous_superfamily	Tubulin/FtsZ, GTPase domain superfamily	Interproscan
IPR023123 all species →	Homologous_superfamily	Tubulin, C-terminal	Interproscan
IPR018316 all species →	Domain	Tubulin/FtsZ, 2-layer sandwich domain	Interproscan
IPR000217 all species →	Family	Tubulin	Interproscan
IPR002452 all species →	Family	Alpha tubulin	Interproscan
IPR003008 all species →	Domain	Tubulin/FtsZ, GTPase domain	Interproscan
IPR017975 all species →	Conserved_site	Tubulin, conserved site	Interproscan
IPR037103 all species →	Homologous_superfamily	Tubulin/FtsZ-like, C-terminal domain	Interproscan
IPR008280 all species →	Homologous_superfamily	Tubulin/FtsZ, C-terminal	Interproscan
IPR023211 all species →	Homologous_superfamily	DNA polymerase, palm domain superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR045371 all species →	Domain	ADAMTS/ADAMTS-like, cysteine-rich domain 3	Interproscan
IPR013273 all species →	Family	ADAMTS/ADAMTS-like	Interproscan
IPR001590 all species →	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan
IPR050439 all species →	Family	ADAMTS and ADAMTS-like	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR000998 all species →	Domain	MAM domain	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR010294 all species →	Domain	ADAMTS/ADAMTS-like, Spacer 1	Interproscan
IPR030379 all species →	Domain	Septin-type guanine nucleotide-binding (G) domain	Interproscan
IPR016491 all species →	Family	Septin	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10738 all species →	PROTEIN ARGININE N-METHYLTRANSFERASE 5	Interproscan
PTHR11352 all species →	PROLIFERATING CELL NUCLEAR ANTIGEN	Interproscan
PTHR24020 all species →	COLLAGEN ALPHA	Interproscan
PTHR22906 all species →	PROPERDIN	Interproscan
PTHR11588 all species →	TUBULIN	Interproscan
PTHR31511 all species →	PROTEIN CBG23764	Interproscan
PTHR13723 all species →	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan
PTHR18884 all species →	SEPTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008469 all species →	Molecular Function	histone arginine N-methyltransferase activity	Interproscan
GO:0016274 all species →	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216 all species →	Biological Process	peptidyl-arginine methylation	Interproscan
GO:0034969 all species →	Biological Process	obsolete histone arginine methylation	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006275 all species →	Biological Process	regulation of DNA replication	Interproscan
GO:0030337 all species →	Molecular Function	DNA polymerase processivity factor activity	Interproscan
GO:0006272 all species →	Biological Process	leading strand elongation	Interproscan
GO:0006298 all species →	Biological Process	mismatch repair	Interproscan
GO:0019985 all species →	Biological Process	translesion synthesis	Interproscan
GO:0043626 all species →	Cellular Component	PCNA complex	Interproscan
GO:0005874 all species →	Cellular Component	microtubule	Interproscan
GO:0007017 all species →	Biological Process	microtubule-based process	Interproscan
GO:0005200 all species →	Molecular Function	structural constituent of cytoskeleton	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0000278 all species →	Biological Process	mitotic cell cycle	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0030198 all species →	Biological Process	extracellular matrix organization	Interproscan
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005940 all species →	Cellular Component	septin ring	Interproscan
GO:0015630 all species →	Cellular Component	microtubule cytoskeleton	Interproscan
GO:0031105 all species →	Cellular Component	septin complex	Interproscan
GO:0032153 all species →	Cellular Component	cell division site	Interproscan
GO:0034613 all species →	Biological Process	protein localization	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan
GO:0061640 all species →	Biological Process	cytoskeleton-dependent cytokinesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04802	PCNA; proliferating cell nuclear antigen	-	DNA repair and recombination proteins	ko03400	deepkoala
K07374	TUBA; tubulin alpha	-	Exosome	ko04147	deepkoala
K16939	SEPT6_8_11; septin 6/8/11	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.