Detailed information of g20181.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_047131190.1, uncharacterized protein LOC124805807 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
P15800Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000034DomainLaminin IVInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0008045Biological Processmotor neuron axon guidanceInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0016358Biological Processdendrite developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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