Detailed information of g20227.t1 in Acropora digitifera

Genomic Location: chr9Alt:20152350...20171238
NR annotation: XP_029205050.2, smoothelin-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5M775Cytospin-B OS=Homo sapiens OX=9606 GN=SPECC1 PE=1 SV=1
Q5SXY1Cytospin-B OS=Mus musculus OX=10090 GN=Specc1 PE=1 SV=2
Q2KN93Cytospin-A OS=Danio rerio OX=7955 GN=specc1la PE=2 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12510
all species →
SmoothelinSmoothelin cytoskeleton proteinFamilyInterproscan
PF00307
all species →
CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001715
all species →
DomainCalponin homology domainInterproscan
IPR022189
all species →
DomainSmoothelinInterproscan
IPR036872
all species →
Homologous_superfamilyCH domain superfamilyInterproscan
IPR050540
all species →
FamilyF-actin Monooxygenase MicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23167
all species →
CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g20227.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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