Detailed information of g20344.t1 in Acropora digitifera

Genomic Location: chr9Alt:21961279...21962922
NR annotation: XP_015776718.1, PREDICTED: opsin-3-like [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00001
all species →		7tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000276
all species →		FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452
all species →		DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050125
all species →		FamilyG-protein coupled receptor opsinsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240
all species →		OPSINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004930
all species →		Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186
all species →		Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0007602
all species →		Biological ProcessphototransductionInterproscan
GO:0008020
all species →		Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482
all species →		Biological Processcellular response to light stimulusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g20344.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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