Gene detail

Detailed information of g20384.t1 in Acropora digitifera

Genomic Location: chr9Alt:22531139...22534851
NR annotation: XP_015762216.1, PREDICTED: uncharacterized protein LOC107341324 isoform X2 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g20384.t1

ATGTCTTCGCAGAGCCAAACAATTGCGGCTCTTGGTCGTCCATTTGACCTTGGCATGCTATATGATCGCCGTTCAGAAAAGCTGATCCCTGGGAGGACATTGTGGTCTCCAGATCATCTGAGTCAGGCGGTTACCACGATAACCAAACCATATACCAACACAGAAGTCCTAGCCGAAGACACAATTGACGATAAAGCAAGTGCTCTCAATATTGAAGCGAGCCTTAAATTGAGTTTCCTTGGGGGATTAGTTAATGTACAAGGAGCAGCTAAATACTTAGATGATAGAAAGACATCAAGTAATCATTCTCGCGTGGTCTTAAAGTATGAGACAACAACCGAGTTTAAACAGCTGACCATGGAACATCTGGGAAAGGTGCAGTATCCAGAGGTGTTTGATCATGATATTGCCACTGATGTAGTGGTTGGAATCCTGTATGGTGCAAACGCATTCTTGATCTTCGACCAGGAAGTTTCCGAAGATGAATCTTTTAAGGAGGTACATGGTAATATGGAAGTACTGGTGAAAGCCCTGCGAAGTACCTCTGTAGACGGAAAGGGGTCTCTCGAGATAAAGGAAGACCAGAAGAAGAAAATAGAGAAAATGCATTGCAAGATGTATGGAGATTTCAGAACAGAGGAAAGTCCAACAACTTACGAAGAAGCAGTAAAGGTCTACAAACAGCTACCATCATTGATTGGGGACAAAGGTCAAAATGCAGTCGCTGTTCAAGTATATTTGCGTCCGCTAAATGAAATCGATAGCAAGGGGAAACGAATGATAAGAGAAATCAATGCAAATTATATGAGCAAGACATGTGAGATTCAAGAACATATACAGTTAATTGAGGCTCAATGCAGCGATCTAATGAGAAAGGATGTTTGCTCGTCGTTCCCTAGAGTGAAGAAGCAGTTATCCTTTTTCAAAAACAATATCTCTCGATACAAGATCTTTTTCCAGAAGAAACTGTTGCCTTTGCTCATAAGCATAAGAGGAGAGATGAAGAAATTACAAGGTTTCGCTCGTTTCTTGGGAAACACTCCTTTTGTTAATCCTGAGGATGTAGAAAACGAAGCATTCGACCCAAGCAATGAGAATGTTGTTTGCTGTACCTTTAAGATTGGCAAGGAAGACGATCCTCAGGTTTTGAGCATGGATGGGTACCTTACTGGAAAGGTTCTCCCGCCGTTGAATAGAGAGGCATCCACAGGTATTGATGACAACATTGTCAATAAAAAGATGCGTCAGACATTGAAACAGTTTGCAGAACTCAAAGCTGCAAATGAAGACCACAAGGAAGTGAAATTCTTCGCCACAGAGGAAAGTCTTTCTGACACTTTCACTGGAAACCGTGGAGTCTTTATCCATTTGTATGAAGATGGCGATCTAGATAATGACGATTTTAAGTTATCACCAAAGCCAGAGAAACTAGAAGCAGCGAGCGTGCGAGATGATTCTATCGAGCTTCAGTGGAATGATCCGCACGGGAGCGAAAACAACATCAAAAAGTACAAAGTTCAGTACAGAAAAGCTGAAGATGCGAGCCTCGACTGGATCACTCAGTACTCAGTTTGTGGTGACGAAGCTAAGCAAACGGCTACTGTATCTGGGCTTTACCCCGCTACCAGGTACTTGTTCCGGGTATGCGCTGTGGGACAGATTGTGGTCAGCCAATACAGTGATACTTTAACTGAAACTACCAAACCAACGAGTCCGCCTGGCAAGCCATCCTTTGTAGCTGCAACGACTGACACAATTACTGTTGCATTTGCGAGACCCAAAAATATTGGAGAGAGAGTTAAGATTGAAAAATACAAGATTGAGTGGAGGACCAATTCCCAACATATGGAGCAAGTCCTGCAGCACACAGAAGACGCGTCGCCCACTTGCACAATCGAAGGTCTTCAAGCAGAAGTACCTTACAAATTTAGAGTTATCGCGATTTGTGGCAGAGAAGGAGACAGTGCGCCCAGTGACCTCAGTGATTCTTTGCAAACTACGCTATCCCCCCAAGAATTTGTTACAAGCAGGATTCTTACCCACTGTACCCTAGTTCAACCACCAGAGGATGGAAAGCCAGCAGTATACAGTCTTCCTCTAATTCTGACTTACGAAGACAGCTGCAGTCAACTGCGAAAGTTTGTCGTTAATTTTGTTGAGGAAAGGACGCAGCTGCCTGGTAAATGTGACTCCGTTCATGAGAAAGTAATTATGGTGGTTGGGTCAACGGGCTTTGGCAAGACAACCACAGTTAATGCCATGATCAACCACGTCCTGGGAGTGCAGTGGAAGGACGACTTTCGTCTCAAGATGATCCACGAAAGTTCTAGTAACCAGGGGGCGGAAATGATCGGAAATCAAGCAAACAGTCGAACCCAGTTCGTATCGTGTTACACTCTACCGTACATGGAAGGATTCAAAGTACCTTACAACCTCACTATTGTAGACACACCTGGCTTTGGAGATACAAGAGGAATTGAACATGACAAAGTGATAACCGAGCAGATCCGCAGATTCTTTAAAACAAAGGGCTCAGCAGGCATTGATCACGTTGATGCCATCTGCTTCGTGGCTCAAGCTGGCAATCCGAGGCTCTCTCCAAAGCAACAGTATGTTTTTGACAGAATCCTGGCCATGTTTGGAAAAGATATCGAGAAGAACATCTTAGTGCTCTTTACCTTTGCTGATGGTCAAAAGCCTCAAGCTCTGTCGGCATTGCAAGCAACTGGAATCCTAGAGGACGGTAATAACTTCTTCAAGTTTAACAACAGCGCCCTATTTGTAGCTAACTCTGGTGAAGATGACGAAGGCAACTTCGACAGAATGTTTTGGAGAATGGGAATCAAGAGTTTCGAGAAGTTCTTTCAAGGCTTGGCCCAGATGGAACCAAAAAGTCTTGTCCTCACCAAGCAGGTGTTGGACGAAAGAGCTCAGCTGGAAGATCGATTCAGTGCTTTGAAGGGGAAGATTGCCCTTGGAGCCATGGAGCTGGGTCGACTGATGATGTTAAAGAGTATAAACGATGACATGGAAGCTTTCGCGAATAGCTGGTACTATTCAGCGGATTTTGACCATTTCTCTGGGAGAAGCATAGAGGCTGAGTTGAGGAAAGCAGAAGGTAGGTTTAATCAAACCAATCTCATTGTGTTGAGCCTTGTCGCCGAATTGCAACGTGGTCTGAAGAAGCTGTCAGAAATTGCCCTCAAAAAAGATCCACTACAACAAGTGGACTACTTGGATATGCTCATAGATTCTGAGAAATCAGAATCAAGACCTGGCTGGCAAGATCGTGTAAAATCGTTGCAGAAAACAAGGGATGAAGCAGTGCAAGTCAGTCGTCTTGGAAAGCCTGGATATGATCCATGGGAAAATTATCGAGAGAAGGAGGAAACTCGTTGGTTCTTTCTGAAGCAAACTGAAGAGGTTTAA

Transcript

chr9Alt.g20384.t1

ACGATAGCTTTCTTTGTTCCATTCCGCAGACAGCATTTCTCGCCTAAAATTCTTCCAGTGAGATTTTTGGCATTAAGAAGTGTGCAAAAAATGTCTTCGCAGAGCCAAACAATTGCGGCTCTTGGTCGTCCATTTGACCTTGGCATGCTATATGATCGCCGTTCAGAAAAGCTGATCCCTGGGAGGACATTGTGGTCTCCAGATCATCTGAGTCAGGCGGTTACCACGATAACCAAACCATATACCAACACAGAAGTCCTAGCCGAAGACACAATTGACGATAAAGCAAGTGCTCTCAATATTGAAGCGAGCCTTAAATTGAGTTTCCTTGGGGGATTAGTTAATGTACAAGGAGCAGCTAAATACTTAGATGATAGAAAGACATCAAGTAATCATTCTCGCGTGGTCTTAAAGTATGAGACAACAACCGAGTTTAAACAGCTGACCATGGAACATCTGGGAAAGGTGCAGTATCCAGAGGTGTTTGATCATGATATTGCCACTGATGTAGTGGTTGGAATCCTGTATGGTGCAAACGCATTCTTGATCTTCGACCAGGAAGTTTCCGAAGATGAATCTTTTAAGGAGGTACATGGTAATATGGAAGTACTGGTGAAAGCCCTGCGAAGTACCTCTGTAGACGGAAAGGGGTCTCTCGAGATAAAGGAAGACCAGAAGAAGAAAATAGAGAAAATGCATTGCAAGATGTATGGAGATTTCAGAACAGAGGAAAGTCCAACAACTTACGAAGAAGCAGTAAAGGTCTACAAACAGCTACCATCATTGATTGGGGACAAAGGTCAAAATGCAGTCGCTGTTCAAGTATATTTGCGTCCGCTAAATGAAATCGATAGCAAGGGGAAACGAATGATAAGAGAAATCAATGCAAATTATATGAGCAAGACATGTGAGATTCAAGAACATATACAGTTAATTGAGGCTCAATGCAGCGATCTAATGAGAAAGGATGTTTGCTCGTCGTTCCCTAGAGTGAAGAAGCAGTTATCCTTTTTCAAAAACAATATCTCTCGATACAAGATCTTTTTCCAGAAGAAACTGTTGCCTTTGCTCATAAGCATAAGAGGAGAGATGAAGAAATTACAAGGTTTCGCTCGTTTCTTGGGAAACACTCCTTTTGTTAATCCTGAGGATGTAGAAAACGAAGCATTCGACCCAAGCAATGAGAATGTTGTTTGCTGTACCTTTAAGATTGGCAAGGAAGACGATCCTCAGGTTTTGAGCATGGATGGGTACCTTACTGGAAAGGTTCTCCCGCCGTTGAATAGAGAGGCATCCACAGGTATTGATGACAACATTGTCAATAAAAAGATGCGTCAGACATTGAAACAGTTTGCAGAACTCAAAGCTGCAAATGAAGACCACAAGGAAGTGAAATTCTTCGCCACAGAGGAAAGTCTTTCTGACACTTTCACTGGAAACCGTGGAGTCTTTATCCATTTGTATGAAGATGGCGATCTAGATAATGACGATTTTAAGTTATCACCAAAGCCAGAGAAACTAGAAGCAGCGAGCGTGCGAGATGATTCTATCGAGCTTCAGTGGAATGATCCGCACGGGAGCGAAAACAACATCAAAAAGTACAAAGTTCAGTACAGAAAAGCTGAAGATGCGAGCCTCGACTGGATCACTCAGTACTCAGTTTGTGGTGACGAAGCTAAGCAAACGGCTACTGTATCTGGGCTTTACCCCGCTACCAGGTACTTGTTCCGGGTATGCGCTGTGGGACAGATTGTGGTCAGCCAATACAGTGATACTTTAACTGAAACTACCAAACCAACGAGTCCGCCTGGCAAGCCATCCTTTGTAGCTGCAACGACTGACACAATTACTGTTGCATTTGCGAGACCCAAAAATATTGGAGAGAGAGTTAAGATTGAAAAATACAAGATTGAGTGGAGGACCAATTCCCAACATATGGAGCAAGTCCTGCAGCACACAGAAGACGCGTCGCCCACTTGCACAATCGAAGGTCTTCAAGCAGAAGTACCTTACAAATTTAGAGTTATCGCGATTTGTGGCAGAGAAGGAGACAGTGCGCCCAGTGACCTCAGTGATTCTTTGCAAACTACGCTATCCCCCCAAGAATTTGTTACAAGCAGGATTCTTACCCACTGTACCCTAGTTCAACCACCAGAGGATGGAAAGCCAGCAGTATACAGTCTTCCTCTAATTCTGACTTACGAAGACAGCTGCAGTCAACTGCGAAAGTTTGTCGTTAATTTTGTTGAGGAAAGGACGCAGCTGCCTGGTAAATGTGACTCCGTTCATGAGAAAGTAATTATGGTGGTTGGGTCAACGGGCTTTGGCAAGACAACCACAGTTAATGCCATGATCAACCACGTCCTGGGAGTGCAGTGGAAGGACGACTTTCGTCTCAAGATGATCCACGAAAGTTCTAGTAACCAGGGGGCGGAAATGATCGGAAATCAAGCAAACAGTCGAACCCAGTTCGTATCGTGTTACACTCTACCGTACATGGAAGGATTCAAAGTACCTTACAACCTCACTATTGTAGACACACCTGGCTTTGGAGATACAAGAGGAATTGAACATGACAAAGTGATAACCGAGCAGATCCGCAGATTCTTTAAAACAAAGGGCTCAGCAGGCATTGATCACGTTGATGCCATCTGCTTCGTGGCTCAAGCTGGCAATCCGAGGCTCTCTCCAAAGCAACAGTATGTTTTTGACAGAATCCTGGCCATGTTTGGAAAAGATATCGAGAAGAACATCTTAGTGCTCTTTACCTTTGCTGATGGTCAAAAGCCTCAAGCTCTGTCGGCATTGCAAGCAACTGGAATCCTAGAGGACGGTAATAACTTCTTCAAGTTTAACAACAGCGCCCTATTTGTAGCTAACTCTGGTGAAGATGACGAAGGCAACTTCGACAGAATGTTTTGGAGAATGGGAATCAAGAGTTTCGAGAAGTTCTTTCAAGGCTTGGCCCAGATGGAACCAAAAAGTCTTGTCCTCACCAAGCAGGTGTTGGACGAAAGAGCTCAGCTGGAAGATCGATTCAGTGCTTTGAAGGGGAAGATTGCCCTTGGAGCCATGGAGCTGGGTCGACTGATGATGTTAAAGAGTATAAACGATGACATGGAAGCTTTCGCGAATAGCTGGTACTATTCAGCGGATTTTGACCATTTCTCTGGGAGAAGCATAGAGGCTGAGTTGAGGAAAGCAGAAGGTAGGTTTAATCAAACCAATCTCATTGTGTTGAGCCTTGTCGCCGAATTGCAACGTGGTCTGAAGAAGCTGTCAGAAATTGCCCTCAAAAAAGATCCACTACAACAAGTGGACTACTTGGATATGCTCATAGATTCTGAGAAATCAGAATCAAGACCTGGCTGGCAAGATCGTGTAAAATCGTTGCAGAAAACAAGGGATGAAGCAGTGCAAGTCAGTCGTCTTGGAAAGCCTGGATATGATCCATGGGAAAATTATCGAGAGAAGGAGGAAACTCGTTGGTTCTTTCTGAAGCAAACTGAAGAGGTTTAAGACGGATGCTGAGTCAAGCTTACTAAAAGGGGAGAAAGCAGCAAAGAAAGTCAGAGAAACTGTCATGGGTTGAGTAAAAGAACGATTTAGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q98993	Verrucotoxin subunit beta OS=Synanceia verrucosa OX=51996 PE=1 SV=3
A0A2P1BRQ0	Cytolytic toxin-alpha OS=Scorpaena plumieri OX=274700 PE=1 SV=1
A0ZSK4	Neoverrucotoxin subunit beta OS=Synanceia verrucosa OX=51996 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF04548 all species →	AIG1	AIG1 family	Domain	Interproscan
PF21109 all species →	Stonustoxin_helical	Stonustoxin helical domain	Domain	Interproscan
PF18078 all species →	Thioredoxin_11	Thioredoxin-like SNTX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006703 all species →	Domain	AIG1-type guanine nucleotide-binding (G) domain	Interproscan
IPR048997 all species →	Domain	Stonustoxin-like, helical domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR040581 all species →	Domain	SNTX, thioredoxin-like domain	Interproscan
IPR052090 all species →	Family	Cytolytic pore-forming toxin	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31594 all species →	AIG1-TYPE G DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g20384.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.