Gene detail

Detailed information of g20470.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: WP_033470104.1, ATP-binding cassette domain-containing protein [Bordetella bronchiseptica]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q2G506	ATM1-type heavy metal exporter OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=atm1 PE=1 SV=1
E7F6F7	Iron-sulfur clusters transporter ABCB7, mitochondrial OS=Danio rerio OX=7955 GN=abcb7 PE=3 SV=1
H2LNR5	Iron-sulfur clusters transporter ABCB7, mitochondrial OS=Oryzias latipes OX=8090 GN=abcb7 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00664	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan
PF00072	Response_reg	Response regulator receiver domain	Domain	Interproscan
PF00005	ABC_tran	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001789	Domain	Signal transduction response regulator, receiver domain	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR039421	Family	Type 1 protein exporter	Interproscan
IPR011006	Homologous_superfamily	CheY-like superfamily	Interproscan
IPR036890	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000160	Biological Process	phosphorelay signal transduction system	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06147	ABCB-BAC; ATP-binding cassette, subfamily B, bacterial	-	Transporters	ko02000	deepkoala