Detailed information of g20495.t1 in Montipora capitata

Genomic Location: Sc0001198:9214...22969
NR annotation: XP_020612562.1, vacuolar protein sorting-associated protein 18 homolog [Orbicella faveolata]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P59015Vacuolar protein sorting-associated protein 18 homolog OS=Danio rerio OX=7955 GN=vps18 PE=2 SV=2
Q9P253Vacuolar protein sorting-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=VPS18 PE=1 SV=2
Q8R307Vacuolar protein sorting-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Vps18 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003470 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00637
all species →		ClathrinRegion in Clathrin and VPSRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000547
all species →		RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23323
all species →		VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0006904
all species →		Biological Processvesicle docking involved in exocytosisInterproscan
GO:0007032
all species →		Biological Processendosome organizationInterproscan
GO:0007033
all species →		Biological Processvacuole organizationInterproscan
GO:0007040
all species →		Biological Processlysosome organizationInterproscan
GO:0008333
all species →		Biological Processendosome to lysosome transportInterproscan
GO:0030674
all species →		Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0030897
all species →		Cellular ComponentHOPS complexInterproscan
GO:0048284
all species →		Biological Processorganelle fusionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g20495.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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