Detailed information of g20496.t1 in Montipora capitata

Genomic Location: Sc0001198:33894...41954
NR annotation: CAH3168716.1, unnamed protein product [Porites lobata]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P59015Vacuolar protein sorting-associated protein 18 homolog OS=Danio rerio OX=7955 GN=vps18 PE=2 SV=2
F4IDS7Vacuolar sorting protein 18 OS=Arabidopsis thaliana OX=3702 GN=VPS18 PE=1 SV=1
Q24314Vacuolar protein sorting-associated protein 18 homolog OS=Drosophila melanogaster OX=7227 GN=dor PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003470 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05131
all species →		Pep3_Vps18Pep3/Vps18/deep orange beta-propeller domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR007810
all species →		DomainPep3/Vps18/deep orange, beta-propeller domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23323
all species →		VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0006904
all species →		Biological Processvesicle docking involved in exocytosisInterproscan
GO:0007032
all species →		Biological Processendosome organizationInterproscan
GO:0007033
all species →		Biological Processvacuole organizationInterproscan
GO:0007040
all species →		Biological Processlysosome organizationInterproscan
GO:0008333
all species →		Biological Processendosome to lysosome transportInterproscan
GO:0030674
all species →		Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0030897
all species →		Cellular ComponentHOPS complexInterproscan
GO:0048284
all species →		Biological Processorganelle fusionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g20496.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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