Gene detail

Detailed information of g2053.t1 in Acropora digitifera

Genomic Location: chr1Alt:33885009...33894594
NR annotation: XP_015773879.1, PREDICTED: serine/threonine-protein kinase SIK1-like isoform X2 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g2053.t1

ATGTCAACTTTATCTTCGTTTAATTTTATCAAGATTGTGATCCAAGGCATTTGTGGGCGCTACGGGTCGGATGCAGGGCCCAAAATGGCGACCGAACGAACGAAACGGGCCATCAAGGTCGGATTCTATGATATCGAGAAGACAATTGGCAAAGGAAACTTCGCAGTGGTGAAGCTAGCAAGACATCGCGTCACCAAGAGCCAGGTTGCAATTAAGATCATCGACAAAACACAATTGGACGAGACGAACCTCAAGAAAGTCTACCGCGAAATTCAGATCATGAAACTCCTAAACCATCCGCATATAGTCAAACTCTACCAGGTCATGGAAACGAAAAGCATGCTTTATCTTGTCACAGAATATGCCAGCAACGGAGAAATGTTTAATTATCTGTCCCATGGTGCATTGCCAGAAAAAGAGGCTCGTAAAAAGTTTGCACAGATTTTGAGTGCCGTAGAATACTGTCATGCAAGACATGTGGTGCATCGTGACTTGAAGGCTGAAAATCTTCTTTTGGATCAAAATTTAAACATCAAAATTGCAGACTTTGGATTTGGTAATTACTACACCCCAGGTAGTCCTCTTAACACTTGGTGTGGCAGTCCACCTTACGCTGCCCCAGAAGTGTTTGAAGGCAAGCTTTACCATGGTCCACAGCTAGATATTTGGAGTTTGGGAGTGGTCCTTTACGTTCTAATATGCCGAGCACTACCTTTTGATGGGGGAACTCTTCCCGCTCTCCGAGATAGAGTGCTGGAGGGACGTTTCAGGATTCCGTTTTTCATGTCTACAGAATGTGAACACTTAATTCGACATATGCTTGTGAAAGACCCTAATCAGCGCTACACCATTGAACAAATAAAGAAGCATAAGTGGATGCAGGCCGATCCAGCGGTTAAAACTATTCTTTCGTGCAACACAGAAGAAAATTTTGAAAGAGAGGAAATATTGGAAGAATACAACGAACAAGCTCTTGAACTTATGCAGGGACTTGGCATTGACATCGAGAGAACGAAAACGGCCCTGGCGGATGACGCTTACGATCATCACACAGCTATTTATCATTTACTTGTGGATCGTTTACGGCAACACAGGGCAAGCTATCCTCTTCAGACACAAATCGAGACCAGGCTTCGCCGACCGAGCGGAATCGCGGAGGCTGCTGTTGTACGAGGGAGTAGGACTAATGTCGTTGTGGTTCCTCGCCGCAACGTTCAGCGCACCGTGCCTGCGCAACCGGCGCGGCCGTACATCCCTCTTCAATATGCCATTAATGAACTTCATGAACGTATACCTACGCCGCCTGAAATAAGGCGCGAAATCGCCACGGAGTGTGTGAAAGAACTGTCGCCTGTACGCGAGCCTGGACTCAAAGCGCGCTCAATATCGCCGCGGCAGATGATCGGAGCAGGTTTGTCGCTCGATAATGGGGTCAGTAGAGAATCACCCTCTCCTACACCCCCTCCCGTGGACAAAATGGACAGTGATGATACTGATGAGGAGAAACCAAGAGTGCGACGACATACTGTGCATACCATGCCAAAGCAACCTCTTGTTGTTCCTCCTAACCATCCCCTCTTAGCGCGAGGAGTTTCTGAAGATGTTCTCGAGGGATCGGACATTTTATCACCTCCTCTAAAGCCTGCTATTGTTGTTTCGCACTGCGCGCCAAATAGCGGATTGTTTACATCTGCACCACCTGTCATGTCACAAGGAGGCTCAGGACAGCATCTGCACGAGCCATTTAGAACGCAGTTTCATCACGCGCCTCTTGGGCGGCGCGCCTCGGACGGCACGGCTGTCACTTTGGCGTTTCATCAACATTTACGAGTATCCACCACGAATAATAGAATCAAACAGTTACAACAAGAGCACCAAAAACTGCAAGAACTCTATCAGAAGTCTTTGTCACCGTCAGAGCTTTCGAAGCAGCAGGCGTGTCACTCTGATTATAAAATAAAATATCAACAAATGCGCAAAGAACTGCAGAAACATTACGAACAGCTTATGGCTGTTAAAGAGCAAGAACGCACTGAAGAAAGCGTAGCACCAATGGAGTCTGCTGTGGAACCTCAAGCAGGTTTTCAGCCAGATCAACAAGCTTCGTATTCTTTACCATTACATCGTCAACTTCAACAACTTCACATCGATGCTCGCCATAATCCACTTCGGAGAACACCTTATAAACAAAATCCACACAAACAAGTGTTTAGGACATCATCTTATAAGCGTGCTCAGATCTGCGGTATGCTTCCTCCTTTGGAGAGCGAATCAGCAACGGACGCTCTTGAAAATACAGAACCTTTGGTTCAGGGAGATAGTGACACGAACTTTGGTAGATATTCTATTGTTTCACTCTGA

Transcript

chr1Alt.g2053.t1

AGGAAAGAGCAAACATCGCTAGGGGAAGGACAATTGCATGTCAACTTTATCTTCGTTTAATTTTATCAAGATTGTGATCCAAGGCATTTGTGGGCGCTACGGGTCGGATGCAGGGCCCAAAATGGCGACCGAACGAACGAAACGGGCCATCAAGGTCGGATTCTATGATATCGAGAAGACAATTGGCAAAGGAAACTTCGCAGTGGTGAAGCTAGCAAGACATCGCGTCACCAAGAGCCAGGTTGCAATTAAGATCATCGACAAAACACAATTGGACGAGACGAACCTCAAGAAAGTCTACCGCGAAATTCAGATCATGAAACTCCTAAACCATCCGCATATAGTCAAACTCTACCAGGTCATGGAAACGAAAAGCATGCTTTATCTTGTCACAGAATATGCCAGCAACGGAGAAATGTTTAATTATCTGTCCCATGGTGCATTGCCAGAAAAAGAGGCTCGTAAAAAGTTTGCACAGATTTTGAGTGCCGTAGAATACTGTCATGCAAGACATGTGGTGCATCGTGACTTGAAGGCTGAAAATCTTCTTTTGGATCAAAATTTAAACATCAAAATTGCAGACTTTGGATTTGGTAATTACTACACCCCAGGTAGTCCTCTTAACACTTGGTGTGGCAGTCCACCTTACGCTGCCCCAGAAGTGTTTGAAGGCAAGCTTTACCATGGTCCACAGCTAGATATTTGGAGTTTGGGAGTGGTCCTTTACGTTCTAATATGCCGAGCACTACCTTTTGATGGGGGAACTCTTCCCGCTCTCCGAGATAGAGTGCTGGAGGGACGTTTCAGGATTCCGTTTTTCATGTCTACAGAATGTGAACACTTAATTCGACATATGCTTGTGAAAGACCCTAATCAGCGCTACACCATTGAACAAATAAAGAAGCATAAGTGGATGCAGGCCGATCCAGCGGTTAAAACTATTCTTTCGTGCAACACAGAAGAAAATTTTGAAAGAGAGGAAATATTGGAAGAATACAACGAACAAGCTCTTGAACTTATGCAGGGACTTGGCATTGACATCGAGAGAACGAAAACGGCCCTGGCGGATGACGCTTACGATCATCACACAGCTATTTATCATTTACTTGTGGATCGTTTACGGCAACACAGGGCAAGCTATCCTCTTCAGACACAAATCGAGACCAGGCTTCGCCGACCGAGCGGAATCGCGGAGGCTGCTGTTGTACGAGGGAGTAGGACTAATGTCGTTGTGGTTCCTCGCCGCAACGTTCAGCGCACCGTGCCTGCGCAACCGGCGCGGCCGTACATCCCTCTTCAATATGCCATTAATGAACTTCATGAACGTATACCTACGCCGCCTGAAATAAGGCGCGAAATCGCCACGGAGTGTGTGAAAGAACTGTCGCCTGTACGCGAGCCTGGACTCAAAGCGCGCTCAATATCGCCGCGGCAGATGATCGGAGCAGGTTTGTCGCTCGATAATGGGGTCAGTAGAGAATCACCCTCTCCTACACCCCCTCCCGTGGACAAAATGGACAGTGATGATACTGATGAGGAGAAACCAAGAGTGCGACGACATACTGTGCATACCATGCCAAAGCAACCTCTTGTTGTTCCTCCTAACCATCCCCTCTTAGCGCGAGGAGTTTCTGAAGATGTTCTCGAGGGATCGGACATTTTATCACCTCCTCTAAAGCCTGCTATTGTTGTTTCGCACTGCGCGCCAAATAGCGGATTGTTTACATCTGCACCACCTGTCATGTCACAAGGAGGCTCAGGACAGCATCTGCACGAGCCATTTAGAACGCAGTTTCATCACGCGCCTCTTGGGCGGCGCGCCTCGGACGGCACGGCTGTCACTTTGGCGTTTCATCAACATTTACGAGTATCCACCACGAATAATAGAATCAAACAGTTACAACAAGAGCACCAAAAACTGCAAGAACTCTATCAGAAGTCTTTGTCACCGTCAGAGCTTTCGAAGCAGCAGGCGTGTCACTCTGATTATAAAATAAAATATCAACAAATGCGCAAAGAACTGCAGAAACATTACGAACAGCTTATGGCTGTTAAAGAGCAAGAACGCACTGAAGAAAGCGTAGCACCAATGGAGTCTGCTGTGGAACCTCAAGCAGGTTTTCAGCCAGATCAACAAGCTTCGTATTCTTTACCATTACATCGTCAACTTCAACAACTTCACATCGATGCTCGCCATAATCCACTTCGGAGAACACCTTATAAACAAAATCCACACAAACAAGTGTTTAGGACATCATCTTATAAGCGTGCTCAGATCTGCGGTATGCTTCCTCCTTTGGAGAGCGAATCAGCAACGGACGCTCTTGAAAATACAGAACCTTTGGTTCAGGGAGATAGTGACACGAACTTTGGTAGATATTCTATTGTTTCACTCTGAGTCCCCCCTCCTACCCGACTTCCCCCCTCCCCCCTCCAAGAGAAATGTTGTTTTGTAGAAGGTGATCAAACCGTTTTGCTCAAAGAAGAATTCAGTAATTCAGTATTCCTGCAAAGAGATATAATGGGTCCTTTTGTATTGTAGCCTTAAGATTTGATATGGCTCTCAGGAAGGTACATGTGGTAGATTTGTTTTGTGAGAAAAGAATGTGGTCCATTCCGATTGTCCGTATGCTTAAATTCAAATATTTAATTATTTATTTTGTTTATTTAGGAACATGGTGCTTATCACATGGCACATTGACAGGAGTATTTACTATCCATCGTAACGAGTTCAGCCACTAGTTTTCTTTTTTCGTTAAATTTCAAGAAATAAATTATTTCCATTAGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H0K1	Serine/threonine-protein kinase SIK2 OS=Homo sapiens OX=9606 GN=SIK2 PE=1 SV=1
Q8CFH6	Serine/threonine-protein kinase SIK2 OS=Mus musculus OX=10090 GN=Sik2 PE=1 SV=1
Q9IA88	Serine/threonine-protein kinase SIK2 OS=Gallus gallus OX=9031 GN=SIK2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034672 all species →	Domain	Salt-Inducible kinase, catalytic domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24346 all species →	MAP/MICROTUBULE AFFINITY-REGULATING KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16311	SIK2; serine/threonine-protein kinase SIK2	EC:2.7.11.1	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.