Detailed information of g20553.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: WP_175162551.1, alanine--tRNA ligase [Achromobacter aegrifaciens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7VXE1Alanine--tRNA ligase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=alaS PE=3 SV=1
A9IK31Alanine--tRNA ligase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) OX=340100 GN=alaS PE=3 SV=1
Q7WHL6Alanine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=alaS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF02272DHHA1DHHA1 domainFamilyInterproscan
PF01411tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002318FamilyAlanine-tRNA ligase, class IIcInterproscan
IPR018162Homologous_superfamilyAlanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilyInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR003156DomainDHHA1 domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR050058FamilyAlanine--tRNA ligaseInterproscan
IPR018165DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan
IPR018164DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR023033FamilyAlanine-tRNA ligase, eukaryota/bacteriaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11777ALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004813Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006419Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01872AARS, alaS; alanyl-tRNA synthetaseEC:6.1.1.7
Transfer RNA biogenesisko03016deepkoala

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