Detailed information of g206.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012562791.1, syntaxin-5 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q08DB5Syntaxin-5 OS=Bos taurus OX=9913 GN=STX5 PE=2 SV=1
Q13190Syntaxin-5 OS=Homo sapiens OX=9606 GN=STX5 PE=1 SV=2
Q08851Syntaxin-5 OS=Rattus norvegicus OX=10116 GN=Stx5 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00130C1_1Phorbol esters/diacylglycerol binding domain (C1 domain)DomainInterproscan
PF00609DAGK_accDiacylglycerol kinase accessory domainFamilyInterproscan
PF00781DAGK_catDiacylglycerol kinase catalytic domainFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF14752RBP_receptorRetinol binding protein receptorFamilyInterproscan
PF04727ELMO_CED12ELMO/CED-12 familyFamilyInterproscan
PF03028Dynein_heavyDynein heavy chain region D6 P-loop domain DomainInterproscan
PF18198AAA_lid_11Dynein heavy chain AAA lid domainDomainInterproscan
PF18199Dynein_CDynein heavy chain C-terminal domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF05739SNARESNARE domainFamilyInterproscan
PF11416Syntaxin-5_NSyntaxin-5 N-terminal, Sly1p-binding domainFamilyInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF02214BTB_2BTB/POZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR017438Homologous_superfamilyInorganic polyphosphate/ATP-NAD kinase, N-terminalInterproscan
IPR002219DomainProtein kinase C-like, phorbol ester/diacylglycerol-binding domainInterproscan
IPR037607FamilyDiacylglycerol kinaseInterproscan
IPR000756DomainDiacylglycerol kinase, accessory domainInterproscan
IPR046349Homologous_superfamilyC1-like domain superfamilyInterproscan
IPR001206DomainDiacylglycerol kinase, catalytic domainInterproscan
IPR016064Homologous_superfamilyNAD kinase/diacylglycerol kinase-like domain superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR026612FamilyReceptor for retinol uptake STRA6-likeInterproscan
IPR006816DomainELMO domainInterproscan
IPR050868FamilyEngulfment and cell motility domain-containing proteinInterproscan
IPR042219Homologous_superfamilyDynein heavy chain AAA lid domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR043160Homologous_superfamilyDynein heavy chain, C-terminal domain, barrel regionInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR004273DomainDynein heavy chain region D6 P-loop domainInterproscan
IPR041658DomainDynein heavy chain AAA lid domainInterproscan
IPR041228DomainDynein heavy chain, C-terminal domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR006012Conserved_siteSyntaxin/epimorphin, conserved siteInterproscan
IPR045242FamilySyntaxinInterproscan
IPR000727DomainTarget SNARE coiled-coil homology domainInterproscan
IPR021538DomainSyntaxin-5, N-terminal, Sly1p-binding domainInterproscan
IPR010989Homologous_superfamilySNAREInterproscan
IPR003975FamilyPotassium channel, voltage dependent, Kv4Interproscan
IPR005821DomainIon transport domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR003131DomainPotassium channel tetramerisation-type BTB domainInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR003968FamilyPotassium channel, voltage dependent, KvInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR11255DIACYLGLYCEROL KINASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR21444COILED-COIL DOMAIN-CONTAINING PROTEIN 180Interproscan
PTHR12771ENGULFMENT AND CELL MOTILITYInterproscan
PTHR46961DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEINInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR19957SYNTAXINInterproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004143Molecular FunctionATP-dependent diacylglycerol kinase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0046339Biological Processdiacylglycerol metabolic processInterproscan
GO:0046834Biological Processlipid phosphorylationInterproscan
GO:0007205Biological Processobsolete protein kinase C-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0071939Biological Processvitamin A import into cellInterproscan
GO:0034632Molecular Functionretinol transmembrane transporter activityInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005484Molecular FunctionSNAP receptor activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006906Biological Processvesicle fusionInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0048278Biological Processvesicle dockingInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0051260Biological Processprotein homooligomerizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00901dgkA, DGK; diacylglycerol kinase (ATP)EC:2.7.1.107
Membrane traffickingko04131deepkoala
Cilium and associated proteinsko03037deepkoala
Ion channelsko04040deepkoala
Choline metabolism in cancerko05231deepkoala

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