Gene detail

Detailed information of g20602.t1 in Acropora digitifera

Genomic Location: chr9Alt:25222697...25257067
NR annotation: XP_044174175.1, uncharacterized protein LOC114947269 isoform X2 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g20602.t1

ATGATGTTTTACCGATTTGTTGTGGCGAGCGCTTTTGTCATCCTTTTGTTTGCCTCAAGTGTAACAGGTTCTTTTCTAAGTACCTTGCGAGGCTTGCATATTCCTCGTTTTATGAAGTCGTTAAGATTCTTAAATTTGAGCCGTTCTCGTTGCCGTTGTCTTCGAACGAGAGAACGCTTCCTAGTTTCGTTTCACAGGCGATTAAAACCCAACTCATTCCGCTTAATGCTACGCGTACTAGCTTTTTCCAAACTGGCTGAGATTCCAGGATCCAATCGCTCCTATTTAGTCACTGATCATGATTGGAGATACAAAGAATTCCTAGTGCGAGCGAAAAATAGCCTCGGAGGGGGATTCCCCAGCGAAATAGTAGGACGCTGTATAACAGGCGCAAAACGTAACTATAAAGATCATCATCTTCCAAAAACAGACCCAGGCCTTGATCCCCAGATCTGGAACGGAGATAACTGTACATATCTAATTTATTATAATCTGTATGATGAGGAGGAAGGGTGGAATATCGTACCATGGACCTCTAACTGTAATTCATCTTGCTGTACCTTCGAGCTCACTAATTTGTCGTCCAATACGGAGTACACACTTCAAGTTCTAGCGGAAACCTTATGGGTTAAAGAACTGTATAGCAATGAGATCAGAGCTCTTTCAGGGCAGACGACACCACCTGCGCCAGCTAAAGTGACAGTTGTTGGTGTGGACTCGAGTTCTGTGGAGGTGGAATGGACGGCGATACAGGTGTCTTCTCCCAAGACAGTCGATGGTTATTGGATTTCAGCTGAAGTTGCAAGTACACTTCCAAAGGATACTATTTCTGTCCATGTCAATACAAGCCTAAGAGGGGTGGTGACTGGACTTAGGCCTTGGACCACTTACACGTTGGCAGTAGCGGGATATAACAATGCAGGAAATGGTACTTTGAAATCACAAAATGTTACAACCATTGATTCAAAGGATTCTTACTTCCTTTTGTCCCTAAGAATCACCAGCGAAGTGTTCACTGAGGATCTCAAAGATCAATCCTCAAGCAAATACAAATGGTTGAAAACAAATTTAAGCAATCAGGTGAGCCGAGGTGCTCGGCAGAAACAATACAAGGGGTTGCGTGGTCCACAACGGCTCAAGGAGGAACCGACATACAACCTTGTCCATCTGGGGCCAGAGGTCGAAGCAATAACAAGAGGCTATCAGTCAAACACCCGCTTTCGGGAAGTCCTTTCTGGACTTGTGAACGCAACACAGCCAATAACAAACGATACTACGAGGCCATCACAGATATACGGCGGAGATCTTTTGGTATCTGTGAAAATTCTCGTTAGACTGGCGGAGTATAATAACGCGAGCCAAGGAAACATAAGTTCCGAGGAAGACGTTCACAATTTTGTGACTGTAGTCAGCAATTTACTGGACCCAGGGAACACAATCACTTGGCAAAATTTAGAACAAGAAGGGAACGGTACAAGCCGAACATTAATCAAAGCAGTCGATAGTTATGGATTGGGAGTTGCTGCAACATTGAACAGAACGACCAAATCAAGAAGAGTTGAAACAAAGAACTTGCTGATGAGTATAACACGGGTCACTCGGGACGGACTGGTGAAAAATGAAGGCCTAAAGGTGTCGTATCAAAAGAGCTCGATCCAGCTGCCATCAGAAGCGTTCGGCTCAAACTACTCCCACGTGGTTAGTGTAATCTATCTAACATTGAACGATGTAATATCACTGCGCAGAGGAAAATATGAGAACGTGACTTCCTTACCCAACACTACTGTGGTATCTTCGACTGTCTTTCCACCTCCTCGAAAAAACTTCATTGAGCCGGTCAAGATCGTTCTTGAAAACAGAAGGGTTAGTGTTCCATCCGGTGCCGCCTTGAAAACAACATGTGTCTTTTGGCGACCTGGAGGTTCTTCGTTGTGGGAAACCAGAGGCTGCGAGCTTGTGCCGAGTGAATCTGATGCAAACAAAACAACATGCAATTGTGATCATTTGACCATATTTGCGTCACTGATGGATCTCATTGACTCAAATGTTGGAGAAGCTCACCGTAAAGCCCTTGAAATGATTTCAATTGTCGGATGCTCTATCTCCTTGATCGCTGTCCTTGTAACAATTGCTGTCTCTCTGATATTTTGGCGAGCAATCAAAAGTCCAAGAGCAAAAGTTCTTCTTAACTTGTGCATTGCCATCGCCTTGTCTTGCATCTTTGTGATCTCTGAAGGATTTGCCAGGGACAACAAGGTTGGCTGCATCGTAGTCGCCGCCTTGCTTCACTATTTCCTCTTGGCCATGTTTTCGTGGATGCTTTGCGAGGGTGTGTTCCTCTATATATTGCTGGTCAAAGTATTTGGAGGCGGACCTGAGGAGAAAGTCAAATATTTTTACATTTTTGGATGGGGCTTCCCTGCCATTATCGTTGCCATTTCATTGGCTGCCACTCAAACTGTGGGTTACGGAACTGCACATGCGTGCTGGCTTGATATTTCCAGCGGGCTGATTTGGGCTTTTATTGCGCCCGTGATAAGCATTATTTTGGTTAATATCGTAGCATTCATCTTGGTTATTCGTAAAATGATGGCAACGAGACATATGCAAAACAAGACGCAAATAGAAAAAGTCAAAGCTGGGATCAAGGCCTCCGCTGTCATTCTCCCTTTGCTTGGAATCACGTGGTTATTTGGACTTCTCGCCTTCAATTCAGCAACAATTGCCTTCAAGTACATCTTTGCTATCTCCAATTCTCTCCAGGGATTCATGATATTTATTTTCCATTGTTTGCTGAATGAGCAAATAAGAGATGCGATAAAGCGGACGCGTGATAAAAGCAGTTCAGGTCTCGTGCCATTAAATCCAAAAAGCAAACCATCTCCAAACCCTCAAGCGAATTTTGCAGTAAGGCAGCTGCAAAGAGTCTCGAAGAAGAAGTCCATCAGAGAGCATAAGGATTACGAACTGGTGGATATGGCAGCTGAGGGCAGTGAAGATCTTTCGGTCGGAAATCAGGAATTGAGCACCAGGCCTGCTGTGGCAAAATGTGGGGAAACCGGAGAGGCGCCATCCTCTGCCACTGAGAGGGCAGAGCTGAAACAGCATGACAATGTCAGGAATGAAGAAGAATTCGAGGTCAAAAAAGAAGAAAGAAAAGAAACGATAGATACCGTTCAAGGGGATGCGGAGGCGTTCAAGCTTTCCGGCTACAAAAACGTAAATGTCATTAGTCAATCGAATTCGTGA

Transcript

chr9Alt.g20602.t1

TAGTCAGCGAATTCATCCAAAAAGGTTGAAACGCCAATAGGGTGGACCGTCCCTGAAGATGATGTTTTACCGATTTGTTGTGGCGAGCGCTTTTGTCATCCTTTTGTTTGCCTCAAGTGTAACAGGTTCTTTTCTAAGTACCTTGCGAGGCTTGCATATTCCTCGTTTTATGAAGTCGTTAAGATTCTTAAATTTGAGCCGTTCTCGTTGCCGTTGTCTTCGAACGAGAGAACGCTTCCTAGTTTCGTTTCACAGGCGATTAAAACCCAACTCATTCCGCTTAATGCTACGCGTACTAGCTTTTTCCAAACTGGCTGAGATTCCAGGATCCAATCGCTCCTATTTAGTCACTGATCATGATTGGAGATACAAAGAATTCCTAGTGCGAGCGAAAAATAGCCTCGGAGGGGGATTCCCCAGCGAAATAGTAGGACGCTGTATAACAGGCGCAAAACGTAACTATAAAGATCATCATCTTCCAAAAACAGACCCAGGCCTTGATCCCCAGATCTGGAACGGAGATAACTGTACATATCTAATTTATTATAATCTGTATGATGAGGAGGAAGGGTGGAATATCGTACCATGGACCTCTAACTGTAATTCATCTTGCTGTACCTTCGAGCTCACTAATTTGTCGTCCAATACGGAGTACACACTTCAAGTTCTAGCGGAAACCTTATGGGTTAAAGAACTGTATAGCAATGAGATCAGAGCTCTTTCAGGGCAGACGACACCACCTGCGCCAGCTAAAGTGACAGTTGTTGGTGTGGACTCGAGTTCTGTGGAGGTGGAATGGACGGCGATACAGGTGTCTTCTCCCAAGACAGTCGATGGTTATTGGATTTCAGCTGAAGTTGCAAGTACACTTCCAAAGGATACTATTTCTGTCCATGTCAATACAAGCCTAAGAGGGGTGGTGACTGGACTTAGGCCTTGGACCACTTACACGTTGGCAGTAGCGGGATATAACAATGCAGGAAATGGTACTTTGAAATCACAAAATGTTACAACCATTGATTCAAAGGATTCTTACTTCCTTTTGTCCCTAAGAATCACCAGCGAAGTGTTCACTGAGGATCTCAAAGATCAATCCTCAAGCAAATACAAATGGTTGAAAACAAATTTAAGCAATCAGGTGAGCCGAGGTGCTCGGCAGAAACAATACAAGGGGTTGCGTGGTCCACAACGGCTCAAGGAGGAACCGACATACAACCTTGTCCATCTGGGGCCAGAGGTCGAAGCAATAACAAGAGGCTATCAGTCAAACACCCGCTTTCGGGAAGTCCTTTCTGGACTTGTGAACGCAACACAGCCAATAACAAACGATACTACGAGGCCATCACAGATATACGGCGGAGATCTTTTGGTATCTGTGAAAATTCTCGTTAGACTGGCGGAGTATAATAACGCGAGCCAAGGAAACATAAGTTCCGAGGAAGACGTTCACAATTTTGTGACTGTAGTCAGCAATTTACTGGACCCAGGGAACACAATCACTTGGCAAAATTTAGAACAAGAAGGGAACGGTACAAGCCGAACATTAATCAAAGCAGTCGATAGTTATGGATTGGGAGTTGCTGCAACATTGAACAGAACGACCAAATCAAGAAGAGTTGAAACAAAGAACTTGCTGATGAGTATAACACGGGTCACTCGGGACGGACTGGTGAAAAATGAAGGCCTAAAGGTGTCGTATCAAAAGAGCTCGATCCAGCTGCCATCAGAAGCGTTCGGCTCAAACTACTCCCACGTGGTTAGTGTAATCTATCTAACATTGAACGATGTAATATCACTGCGCAGAGGAAAATATGAGAACGTGACTTCCTTACCCAACACTACTGTGGTATCTTCGACTGTCTTTCCACCTCCTCGAAAAAACTTCATTGAGCCGGTCAAGATCGTTCTTGAAAACAGAAGGGTTAGTGTTCCATCCGGTGCCGCCTTGAAAACAACATGTGTCTTTTGGCGACCTGGAGGTTCTTCGTTGTGGGAAACCAGAGGCTGCGAGCTTGTGCCGAGTGAATCTGATGCAAACAAAACAACATGCAATTGTGATCATTTGACCATATTTGCGTCACTGATGGATCTCATTGACTCAAATGTTGGAGAAGCTCACCGTAAAGCCCTTGAAATGATTTCAATTGTCGGATGCTCTATCTCCTTGATCGCTGTCCTTGTAACAATTGCTGTCTCTCTGATATTTTGGCGAGCAATCAAAAGTCCAAGAGCAAAAGTTCTTCTTAACTTGTGCATTGCCATCGCCTTGTCTTGCATCTTTGTGATCTCTGAAGGATTTGCCAGGGACAACAAGGTTGGCTGCATCGTAGTCGCCGCCTTGCTTCACTATTTCCTCTTGGCCATGTTTTCGTGGATGCTTTGCGAGGGTGTGTTCCTCTATATATTGCTGGTCAAAGTATTTGGAGGCGGACCTGAGGAGAAAGTCAAATATTTTTACATTTTTGGATGGGGCTTCCCTGCCATTATCGTTGCCATTTCATTGGCTGCCACTCAAACTGTGGGTTACGGAACTGCACATGCGTGCTGGCTTGATATTTCCAGCGGGCTGATTTGGGCTTTTATTGCGCCCGTGATAAGCATTATTTTGGTTAATATCGTAGCATTCATCTTGGTTATTCGTAAAATGATGGCAACGAGACATATGCAAAACAAGACGCAAATAGAAAAAGTCAAAGCTGGGATCAAGGCCTCCGCTGTCATTCTCCCTTTGCTTGGAATCACGTGGTTATTTGGACTTCTCGCCTTCAATTCAGCAACAATTGCCTTCAAGTACATCTTTGCTATCTCCAATTCTCTCCAGGGATTCATGATATTTATTTTCCATTGTTTGCTGAATGAGCAAATAAGAGATGCGATAAAGCGGACGCGTGATAAAAGCAGTTCAGGTCTCGTGCCATTAAATCCAAAAAGCAAACCATCTCCAAACCCTCAAGCGAATTTTGCAGTAAGGCAGCTGCAAAGAGTCTCGAAGAAGAAGTCCATCAGAGAGCATAAGGATTACGAACTGGTGGATATGGCAGCTGAGGGCAGTGAAGATCTTTCGGTCGGAAATCAGGAATTGAGCACCAGGCCTGCTGTGGCAAAATGTGGGGAAACCGGAGAGGCGCCATCCTCTGCCACTGAGAGGGCAGAGCTGAAACAGCATGACAATGTCAGGAATGAAGAAGAATTCGAGGTCAAAAAAGAAGAAAGAAAAGAAACGATAGATACCGTTCAAGGGGATGCGGAGGCGTTCAAGCTTTCCGGCTACAAAAACGTAAATGTCATTAGTCAATCGAATTCGTGAAATATTTCACCGAGGCGGGTTCAATGTGTCTCAAGTAAGATACTAGACACGAGTCAGAAAACAAAAAGAAAGTGAGTAAAAATTTAATAGTCCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O14514	Adhesion G protein-coupled receptor B1 OS=Homo sapiens OX=9606 GN=ADGRB1 PE=1 SV=2
C0HL12	Adhesion G protein-coupled receptor B1 OS=Rattus norvegicus OX=10116 GN=Adgrb1 PE=1 SV=1
Q3UHD1	Adhesion G protein-coupled receptor B1 OS=Mus musculus OX=10090 GN=Adgrb1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16489 all species →	GAIN	GPCR-Autoproteolysis INducing (GAIN) domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF01825 all species →	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032471 all species →	Domain	GAIN domain, N-terminal	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR046338 all species →	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR000203 all species →	Conserved_site	GPS motif	Interproscan
IPR017983 all species →	Conserved_site	GPCR, family 2, secretin-like, conserved site	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR008077 all species →	Family	GPCR, family 2, brain-specific angiogenesis inhibitor	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011 all species →	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016525 all species →	Biological Process	negative regulation of angiogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g20602.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.