Detailed information of g20626.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: WP_012248981.1, hydroxymethylbilane synthase [Bordetella petrii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9IKF3Porphobilinogen deaminase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) OX=340100 GN=hemC PE=3 SV=1
Q7WKM1Porphobilinogen deaminase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=hemC PE=3 SV=1
Q7W785Porphobilinogen deaminase OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) OX=257311 GN=hemC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03741TerCIntegral membrane protein TerC familyFamilyInterproscan
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR022301FamilyIntegral membrane protein YjbEInterproscan
IPR000860FamilyPorphobilinogen deaminaseInterproscan
IPR005496FamilyIntegral membrane protein TerCInterproscan
IPR022419Binding_sitePorphobilinogen deaminase, dipyrromethane cofactor binding siteInterproscan
IPR022418DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR022417DomainPorphobilinogen deaminase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11557PORPHOBILINOGEN DEAMINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0018160Biological Processpeptidyl-pyrromethane cofactor linkageInterproscan

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