Genomic Location: Sc0001243:22458...23000
NR annotation: XP_029209785.2, DNA-directed RNA polymerase I subunit RPA43-like [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families
| CDS |
| g20733.t1 |
| Transcript |
| g20733.t1 |
| Protein |
| g20733.t1 |
| UniProt accession | Description |
|---|---|
| Q6PHG8 | DNA-directed RNA polymerase I subunit RPA43 OS=Danio rerio OX=7955 GN=polr1f PE=2 SV=2 |
| Q3B726 | DNA-directed RNA polymerase I subunit RPA43 OS=Homo sapiens OX=9606 GN=POLR1F PE=1 SV=1 |
| Q78WZ7 | DNA-directed RNA polymerase I subunit RPA43 OS=Mus musculus OX=10090 GN=Polr1f PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0009693 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03876 all species → | SHS2_Rpb7-N | SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 | Domain | Interproscan |
| PF17875 all species → | RPA43_OB | RPA43 OB domain in RNA Pol I | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005576 all species → | Domain | RNA polymerase Rpb7-like , N-terminal | Interproscan |
| IPR041178 all species → | Domain | RPA43, OB domain | Interproscan |
| IPR036898 all species → | Homologous_superfamily | RNA polymerase Rpb7-like, N-terminal domain superfamily | Interproscan |
| IPR045113 all species → | Family | RNA polymerase subunit Rpb7-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12709 all species → | DNA-DIRECTED RNA POLYMERASE II, III | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006351 all species → | Biological Process | DNA-templated transcription | Interproscan |
| GO:0005736 all species → | Cellular Component | RNA polymerase I complex | Interproscan |
| GO:0006352 all species → | Biological Process | DNA-templated transcription initiation | Interproscan |
g20733.t1.
