Detailed information of g20783.t1 in Acropora digitifera

Genomic Location: chr9Alt:27755817...27797569
NR annotation: XP_029191499.2, nucleoprotein TPR-like isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P12270Nucleoprotein TPR OS=Homo sapiens OX=9606 GN=TPR PE=1 SV=3
F1MA98Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1
F6ZDS4Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07926
all species →		TPR_MLP1_2TPR/MLP1/MLP2-like proteinCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012929
all species →		DomainNucleoprotein TPR/MLP1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18898
all species →		NUCLEOPROTEIN TPR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005643
all species →		Cellular Componentnuclear poreInterproscan
GO:0006406
all species →		Biological ProcessmRNA export from nucleusInterproscan
GO:0017056
all species →		Molecular Functionstructural constituent of nuclear poreInterproscan
GO:1901673
all species →		Biological Processregulation of mitotic spindle assemblyInterproscan
GO:0006606
all species →		Biological Processprotein import into nucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09291TPR, MLP1, MLP2; nucleoprotein TPR-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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