Detailed information of g20800.t1 in Montipora capitata

Genomic Location: Sc0001256:47272...53488
NR annotation: XP_029183608.2, uncharacterized protein LOC114951617 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96321Importin subunit alpha-1 OS=Arabidopsis thaliana OX=3702 GN=IMPA1 PE=1 SV=2
Q71VM4Importin subunit alpha-1a OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0253300 PE=1 SV=2
Q9SLX0Importin subunit alpha-1b OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0155601 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007535 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01749
all species →		IBBImportin beta binding domainRepeatInterproscan
PF00514
all species →		ArmArmadillo/beta-catenin-like repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036975
all species →		Homologous_superfamilyImportin-alpha, importin-beta-binding domain superfamilyInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR002652
all species →		DomainImportin-alpha, importin-beta-binding domainInterproscan
IPR000225
all species →		RepeatArmadilloInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16356
all species →		TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 6 TMCO6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006606
all species →		Biological Processprotein import into nucleusInterproscan
GO:0061608
all species →		Molecular Functionnuclear import signal receptor activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g20800.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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