Gene detail

Detailed information of g20882.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: GFN28555.1, isoleucine--tRNA ligase [Achromobacter denitrificans]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A9IRC2	Isoleucine--tRNA ligase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) OX=340100 GN=ileS PE=3 SV=1
Q7WKD5	Isoleucine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=ileS PE=3 SV=1
Q7W8Z2	Isoleucine--tRNA ligase OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) OX=257311 GN=ileS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06827	zf-FPG_IleRS	Zinc finger found in FPG and IleRS	Domain	Interproscan
PF01252	Peptidase_A8	Signal peptidase (SPase) II	Family	Interproscan
PF08264	Anticodon_1	Anticodon-binding domain of tRNA ligase	Domain	Interproscan
PF00133	tRNA-synt_1	tRNA synthetases class I (I, L, M and V)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033708	Domain	Isoleucyl tRNA synthetase type 1, anticodon-binding domain	Interproscan
IPR050081	Family	Isoleucine--tRNA ligase	Interproscan
IPR010663	Domain	Zinc finger, FPG/IleRS-type	Interproscan
IPR023585	Family	Isoleucine-tRNA ligase, type 1	Interproscan
IPR001872	Family	Peptidase A8, signal peptidase II	Interproscan
IPR009080	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan
IPR002301	Family	Isoleucine-tRNA ligase	Interproscan
IPR013155	Domain	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR009008	Homologous_superfamily	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	Interproscan
IPR001412	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan
IPR002300	Domain	Aminoacyl-tRNA synthetase, class Ia	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42765	SOLEUCYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0004822	Molecular Function	isoleucine-tRNA ligase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006428	Biological Process	isoleucyl-tRNA aminoacylation	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0002161	Molecular Function	aminoacyl-tRNA editing activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01870	IARS, ileS; isoleucyl-tRNA synthetase	EC:6.1.1.5	Transfer RNA biogenesis	ko03016	deepkoala