Detailed information of g20891.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: WP_218371517.1, lysine--tRNA ligase [Bordetella sp. BOR01]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9IQY2Lysine--tRNA ligase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) OX=340100 GN=lysS PE=3 SV=1
Q7VZ37Lysine--tRNA ligase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=lysS PE=3 SV=1
Q7WK46Lysine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=lysS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018149DomainLysyl-tRNA synthetase, class II, C-terminalInterproscan
IPR002313FamilyLysine-tRNA ligase, class IIInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR044136DomainLysine-tRNA ligase, class II, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42918LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004824Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006430Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04567KARS, lysS; lysyl-tRNA synthetase, class IIEC:6.1.1.6
Transfer RNA biogenesisko03016deepkoala

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