Detailed information of g20901.t1 in Acropora digitifera

Genomic Location: chr10Alt:24526...29980
NR annotation: XP_044175373.1, uncharacterized protein LOC122958529 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RHH4Intraflagellar transport protein 172 homolog OS=Danio rerio OX=7955 GN=ift172 PE=2 SV=1
Q6VH22Intraflagellar transport protein 172 homolog OS=Mus musculus OX=10090 GN=Ift172 PE=1 SV=1
Q9JKU3Intraflagellar transport protein 172 homolog OS=Rattus norvegicus OX=10116 GN=Ift172 PE=1 SV=1
 Pfam domain
No Pfam domain signature was detected for g20901.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR008916
all species →
Homologous_superfamilyRetrovirus capsid, C-terminalInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR043128
all species →
Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15722
all species →
IFT140/172-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005930
all species →
Cellular ComponentaxonemeInterproscan
GO:0030992
all species →
Cellular Componentintraciliary transport particle BInterproscan
GO:0036064
all species →
Cellular Componentciliary basal bodyInterproscan
GO:0042073
all species →
Biological Processintraciliary transportInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g20901.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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