Detailed information of g20920.t1 in Acropora digitifera

Genomic Location: chr10Alt:211836...226470
NR annotation: XP_029195726.2, PHD finger protein 20-like protein 1 isoform X2 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2VE56PHD finger protein 20-like protein 1 OS=Bos taurus OX=9913 GN=PHF20L1 PE=2 SV=1
A8MW92PHD finger protein 20-like protein 1 OS=Homo sapiens OX=9606 GN=PHF20L1 PE=1 SV=2
Q8CCJ9PHD finger protein 20-like protein 1 OS=Mus musculus OX=10090 GN=Phf20l1 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20826
all species →		PHD_5PhD finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019786
all species →		Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR016197
all species →		Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR043449
all species →		FamilyPHD finger protein 20-likeInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR002999
all species →		DomainTudor domainInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15856
all species →		PHD FINGER PROTEIN 20-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016573
all species →		Biological Processobsolete histone acetylationInterproscan
GO:0044545
all species →		Cellular ComponentNSL complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g20920.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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