Detailed information of g21.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBV8976590.1, prephenate/arogenate dehydrogenase family protein [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q04983Cyclohexadienyl dehydrogenase OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=tyrC PE=1 SV=2
Q49XG5Prephenate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=tyrA PE=3 SV=1
P43901Prephenate dehydrogenase OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=tyrA PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|OTU|OTU
Ubiquitin FamilyUBD|ZnF|ZnF_A20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00025ArfADP-ribosylation factor familyDomainInterproscan
PF20463PDH_CPrephenate dehydrogenase, dimerization domainDomainInterproscan
PF02153PDH_NPrephenate dehydrogenase, nucleotide-binding domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13959DUF4217Domain of unknown function (DUF4217)DomainInterproscan
PF06041DUF924Bacterial protein of unknown function (DUF924)RepeatInterproscan
PF08246Inhibitor_I29Cathepsin propeptide inhibitor domain (I29)DomainInterproscan
PF00112Peptidase_C1Papain family cysteine proteaseDomainInterproscan
PF16977ApeCC-terminal domain of apextrinFamilyInterproscan
PF01754zf-A20A20-like zinc fingerFamilyInterproscan
PF02338OTUOTU-like cysteine proteaseFamilyInterproscan
PF01040UbiAUbiA prenyltransferase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR006689FamilySmall GTPase superfamily, ARF/SAR typeInterproscan
IPR024156FamilySmall GTPase superfamily, ARF typeInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR003099DomainPrephenate dehydrogenaseInterproscan
IPR046825DomainPrephenate dehydrogenase, dimerization domainInterproscan
IPR008927Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR046826DomainPrephenate dehydrogenase, nucleotide-binding domainInterproscan
IPR050812FamilyPrephenate/Arogenate DehydrogenaseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR025313DomainDomain of unknown function DUF4217Interproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR010323FamilyProtein of unknown function DUF924Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR025661Active_siteCysteine peptidase, asparagine active siteInterproscan
IPR000668DomainPeptidase C1A, papain C-terminalInterproscan
IPR013201DomainCathepsin propeptide inhibitor domain (I29)Interproscan
IPR000169Active_siteCysteine peptidase, cysteine active siteInterproscan
IPR039417DomainPapain-like cysteine endopeptidaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR025660Active_siteCysteine peptidase, histidine active siteInterproscan
IPR013128FamilyPeptidase C1AInterproscan
IPR031569DomainApextrin, C-terminal domainInterproscan
IPR002653DomainZinc finger, A20-typeInterproscan
IPR003323DomainOTU domainInterproscan
IPR051346FamilyOTU Domain-Containing DeubiquitinaseInterproscan
IPR000537FamilyUbiA prenyltransferase familyInterproscan
IPR039653FamilyPrenyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR11711ADP RIBOSYLATION FACTOR-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21363PREPHENATE DEHYDROGENASEInterproscan
PTHR24031RNA HELICASEInterproscan
PTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDInterproscan
PTHR19324PERFORIN-LIKE PROTEIN 1Interproscan
PTHR13367UBIQUITIN THIOESTERASEInterproscan
PTHR11048PRENYLTRANSFERASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0004665Molecular Functionprephenate dehydrogenase (NADP+) activityInterproscan
GO:0006571Biological Processtyrosine biosynthetic processInterproscan
GO:0008977Molecular Functionprephenate dehydrogenase (NAD+) activityInterproscan
GO:0070403Molecular FunctionNAD+ bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0004197Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0008656Molecular Functioncysteine-type endopeptidase activator activity involved in apoptotic processInterproscan
GO:0010952Biological Processpositive regulation of peptidase activityInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:2001235Biological Processpositive regulation of apoptotic signaling pathwayInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0035871Biological Processprotein K11-linked deubiquitinationInterproscan
GO:0070530Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:0070536Biological Processprotein K63-linked deubiquitinationInterproscan
GO:0071108Biological Processprotein K48-linked deubiquitinationInterproscan
GO:0071947Biological Processprotein deubiquitination involved in ubiquitin-dependent protein catabolic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0002083Molecular Functionobsolete 4-hydroxybenzoate decaprenyltransferase activityInterproscan
GO:0006744Biological Processubiquinone biosynthetic processInterproscan
GO:0031305Cellular Componentobsolete integral component of mitochondrial inner membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01365CTSL; cathepsin LEC:3.4.22.15
Ubiquitin systemko04121deepkoala
Prenyltransferasesko01006deepkoala
GTP-binding proteinsko04031deepkoala
Glycosylphosphatidylinositol (GPI)-anchored proteinsko00537deepkoala

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