Detailed information of g2101.t1 in Acropora digitifera

Genomic Location: chr1Alt:34384925...34412150
NR annotation: XP_044180282.1, hemicentin-1-like isoform X2 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →
Ig_3Immunoglobulin domainDomainInterproscan
PF07679
all species →
I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013098
all species →
DomainImmunoglobulin I-setInterproscan
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan
IPR051170
all species →
FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231
all species →
CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043005
all species →
Cellular Componentneuron projectionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g2101.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP