Gene detail

Detailed information of g21109.t1.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: XP_029198518.2, ral guanine nucleotide dissociation stimulator-like 1 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

g21109.t1

ATGATGCCTTCCTTGGATTTGGCTGGTTCTCACACTCCACAGAGGGTTTTCTGGAAGGAAGAGCGTGAAGAAGATGCCATTTACTCGGTTTCTCTGAAGAAGGTTCGATATTGCTCCAAGCTCTCCGCCTCACCGGTAGACGAACCACCGATTTCACAGCTTCAGTGGGAGACAATGCGCGTGAGGACAATAAAAGCCGGATCGTTGGCAAAACTTGTTGAGCATCTTTCTCCAGCTAAAGAATCTTTGGAAGAACTTGACCCTGGTTATTTGTTAGCATTTCTTAGTACCTACAGAACTTTCGCCCAGACTGCAGAAGTTGTCGATCTTTTGTTCGAACGGTATCGATCATTTCTCCATAATGAAGTTGGGGAGAAGGATGAGCTTGTTGAAGGAGTGCTCAGggGTGTGGTTTCTGTCTTTGTAATATGGTTAGAGCAGTTCCCGGCAGATTTTGATGATTCTCCAAAGTACACATGCTTAAACAGAATGCTTAGTTTTGCAAGCTCAGAAATGAAGTCTCAACATGGTGACGAACTTTCCAGAAAGATAAAACATCGATTAGACAAGTTTCAGATTACACCTTTTGAAGATCAAGatctaGATTTTGTCACATTTCACTTGCCTGTGTCATCAAATGTGAACAGTGGTGATGAAACTGACATTTGTTCCATCTCTGAAGAGTTAAACGGTGCCAACTCAGACATGTTGGCCATAGAACCCATACATTGTGCTGAACAGTTAACTGTTATGGATGCCAAACTGTTCAAGAAAGTAATAGCCTGGCATTGTCTAGGCTGTGtctggggaaaaaacaaaaagaatggAAAGGCGTCAACAGTGAAGGCCACTGTAGACCAGTTCAATGCAGTGTCACTCCGTGTCACCTCGTCCATCCTCACATGTTCCAACAGTAAGAGCAGTGGGGCTAATACCAGGGGCAAATACATTTCCTGGTGGATAAGTGTGGCTCAGGAGTGCAGAGATTTGAAGAACTTTTCATCACTGAAAGCTATTTTGTCAGGCTTACAGTCAGCTCCAATTCACAGACTTAAAAAATCATGGTCACACGTGCACAGGGACCAGCAGTCTTTGTATCAAGAGTTGTCAAACATTTTCTCAGAAGATAGTAATCAGCAGAGTAGTAGAGAACTCCTTATGAAGGAAGGAACTGCAAAATGGGCACAGTTCGAGTCAACATCACCAACAAGAAAATTACCAACGTCAAAGAAACGCCGGTCCAGATGCATGGATCCAGGAATTATTCAGGGCACCGTTCCTTATTTGGGCACATTTCTGACGGACCTCATGATGCTAGATACAGCTCTCCCAGACATGACAGAGgATGGTTTGatcaattttgaaaaaagaagaaaaGAGTTTGAAATAATTGCACAGATAAAACTCTTCCAAGAGGCAGCCAAAAACTATGTTTTTTCCCCTGATGAGGAATTTAGGCACTGGTTCGATAATATCAAGACATTTTCCGAAGCAGAAAGCTATCGTTTGTCATGCAAAGTTGAAAAAGTAGAACTAAGATTtgcgaaaaagaaaactacaagaATCAGGCGAATGTTGAGTGAGCCAGACATCAGCAAACTGAGCTTTCTCTCAGATGTTACGCAAACGCTGTCCCCTCCTGTTCCTGATAAACCATGCAAATCGAACGAAAATTCACCAGTCGCACCCCGACGTCACCAGAGAAATaACTCTGGTTCATCGTCTTCCTCCACATCCTCTGGTGTATCATCAGGATCTGAAAGATGTCCAGAAACGTTAGCATTAACCAAACCTTCCTCGTTCTCCCTCCCTCGGGGCCGCTGTCTGCCTACGTTACCTTCTTCATTACCAACGATCGGAAAAACCGGTTTTTCTCGACGGTCTTTGCCAGCGACGCCCGACAGTCCATCGAGTAGATCTGTTCATGCAGGCTGCATCATACGAGTCAGTATCGAGGGAATGGAAGACAAGAGTTCTGGCGGTGTGATCTACAGAGGCATCTGGTTGTCGGATGATGAACGAACCCCTGCTGTCATACGGACTTGTTTGGAGAAACGAGAAATGAAAGCAGACCCTAGTGAATATTGTCTTGTTCAAGTTCTCAGTACCGGAAGTGAACTCGTCATTCCAGACAACGCCAATGTCTATTACGCCTTAAATTCAAGCATGGAGCCTTTGCTGTTCAAGCTCAAGAAAAAGGAGATCGCTGGATCTATTTGA

Transcript

g21109.t1

Protein

Uniprot

Uniprot term	Description
Q6P112	Ral guanine nucleotide dissociation stimulator-like 1 OS=Danio rerio OX=7955 GN=rgl1 PE=2 SV=1
Q60695	Ral guanine nucleotide dissociation stimulator-like 1 OS=Mus musculus OX=10090 GN=Rgl1 PE=1 SV=2
Q9NZL6	Ral guanine nucleotide dissociation stimulator-like 1 OS=Homo sapiens OX=9606 GN=RGL1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00788	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan
PF00617	RasGEF	RasGEF domain	Family	Interproscan
PF00618	RasGEF_N	RasGEF N-terminal motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001895	Domain	Ras guanine-nucleotide exchange factors catalytic domain	Interproscan
IPR000159	Domain	Ras-associating domain	Interproscan
IPR008937	Family	Ras-like guanine nucleotide exchange factor	Interproscan
IPR019804	Conserved_site	Ras guanine-nucleotide exchange factor, conserved site	Interproscan
IPR000651	Domain	Ras-like guanine nucleotide exchange factor, N-terminal	Interproscan
IPR036964	Homologous_superfamily	Ras guanine-nucleotide exchange factor, catalytic domain superfamily	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR023578	Homologous_superfamily	Ras guanine nucleotide exchange factor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23113	GUANINE NUCLEOTIDE EXCHANGE FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007265	Biological Process	Ras protein signal transduction	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17635	RGL1, RGL; ral guanine nucleotide dissociation stimulator-like 1	-	Ras signaling pathway	ko04014	deepkoala