Detailed information of g21113.t1 in Montipora capitata

Genomic Location: Sc0001332:41634...56837
NR annotation: CAH3156589.1, unnamed protein product, partial [Porites evermanni]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9BYK83'-5' exoribonuclease HELZ2 OS=Homo sapiens OX=9606 GN=HELZ2 PE=1 SV=7
E9QAM53'-5' exoribonuclease HELZ2 OS=Mus musculus OX=10090 GN=Helz2 PE=1 SV=1
Q6DFV5Probable helicase with zinc finger domain OS=Mus musculus OX=10090 GN=Helz PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000671 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13087
all species →
AAA_12AAA domainDomainInterproscan
PF13086
all species →
AAA_11AAA domainDomainInterproscan
PF00773
all species →
RNBRNB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR022966
all species →
Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR001900
all species →
DomainRibonuclease II/RInterproscan
IPR041679
all species →
DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR041677
all species →
DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR050180
all species →
FamilyRNR RibonucleaseInterproscan
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR047187
all species →
DomainUpf1-like, C-terminal helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355
all species →
RIBONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0004540
all species →
Molecular FunctionRNA nuclease activityInterproscan
GO:0004386
all species →
Molecular Functionhelicase activityInterproscan
GO:0000175
all species →
Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000932
all species →
Cellular ComponentP-bodyInterproscan
GO:0006402
all species →
Biological ProcessmRNA catabolic processInterproscan
GO:0010587
all species →
Biological ProcessmiRNA catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g21113.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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