Detailed information of g214.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047127988.1, protein SON [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9VHB0Protein Son OS=Drosophila melanogaster OX=7227 GN=Son PE=1 SV=1
Q10576Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans OX=6239 GN=dpy-18 PE=1 SV=2
Q20065Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans OX=6239 GN=phy-2 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF08005PHRPHR domain DomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF08336P4Ha_NProlyl 4-Hydroxylase alpha-subunit, N-terminal regionFamilyInterproscan
PF01585G-patchG-patch domainFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF13975gag-asp_proteasgag-polyprotein putative aspartyl proteaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044598FamilyZinc finger CCHC-type and RNA-binding motif-containing protein 1Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR038648Homologous_superfamilyPHR domain superfamilyInterproscan
IPR012983DomainPHRInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013547DomainProlyl 4-hydroxylase alpha-subunit, N-terminalInterproscan
IPR000467DomainG-patch domainInterproscan
IPR032922FamilyProtein SONInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006028FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46259ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1Interproscan
PTHR19932WD REPEAT AND HMG-BOX DNA BINDING PROTEINInterproscan
PTHR45774BTB/POZ DOMAIN-CONTAININGInterproscan
PTHR46528PROTEIN SONInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0043596Cellular Componentnuclear replication forkInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0022008Biological ProcessneurogenesisInterproscan
GO:0004656Molecular Functionprocollagen-proline 4-dioxygenase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0043484Biological Processregulation of RNA splicingInterproscan
GO:0048024Biological Processregulation of mRNA splicing, via spliceosomeInterproscan
GO:0051726Biological Processregulation of cell cycleInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10477BTBD1_2; BTB/POZ domain-containing protein 1/2-Spliceosomeko03041deepkoala
Ubiquitin systemko04121deepkoala

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