Detailed information of g21626.t1 in Acropora digitifera

Genomic Location: chr10Alt:10802793...10804275
NR annotation: XP_015755047.1, PREDICTED: high mobility group protein B1-like [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03973High mobility group protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HMO1 PE=1 SV=1
 Gene family
Family typeMembership / link
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR051762
all species →		FamilyUpstream Binding Factor 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46318
all species →		UPSTREAM BINDING TRANSCRIPTION FACTORInterproscan

 Gene Ontology
No Gene Ontology signature was detected for g21626.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g21626.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP