Gene detail

Detailed information of g21650.t1 in Acropora digitifera

Genomic Location: chr10Alt:11052453...11079037
NR annotation: XP_044174414.1, uncharacterized protein LOC114968144 isoform X2 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g21650.t1

ATGGAGAGACTTTTCGAAAGTTTGAATGCCATATTTGAGGATCCTGCTTACAGTAATGTCAGGAACAAAATTTTTCCAGCCGCGGAAAAAGACTTGGAACTAGAACCCGGGGCTCCTGTGACACTGAAATCTTCTCCATTGGAAGACGCTTATGATGTCCATGAGGAAATCGGAAAAGGCAAATTTGGCGTTGTGAGGAAAGTTACACAACGCTCCTCCGAGAAATTGTTCGCTGCTAAGTACATCACTCTACGCTCGATAAGCAGCGGTTCATCGCATGAAGACATTCTACACGAAATAAGCATCATGAATCAGCTACACCATAAAAGGCTTGTGGGATTGATTGATGCCTTTGAGGCGCCGGGAAAAATCATCATGATAATGGAATTTTCTTCGCCGAGATCCGTGAGAAAGATGGTTACGAGTCAGTACGAACCTGACAGTTTACGAGTTATGTTGGCGTCATTGGACCGACACCTGAGAGAAAAGGATGCTGCCTTCTCAATAGCGATGGATATCGAGTTTTCCAACAGCAGAAAAGAACTTGAAGGAAAAGCAAGTCTTCTACGTCAAGAAGGTTTCGGAAAAAGGCCAAACGCTGCAAAGGCACACACCTCTCAAGACGAAGAGTTGTTGTGGTCCAAAGGAGTACTTGGAAGCCATTCTTCACAGTCTTTGACACAGACAATGTGGTTCTTGCTCATCCAGCACTTTGTTTTGAATCGCAATTATGCGCATGTTCAATTCCGGATACAATCGGATACCAAACCATTTGAATATGCTGCGTGTGGACTCGAAAATTTTCGCATCCGCAAAAAAATATTTGCGGAAAAAAAAGTTTCCGGATACGTGTGGACATGGCCTAGGCGTCAAAGAATGGGCGTCAACAGCATTAATTCCATTATGAAGAATATGGCAAGTCAAGCAGACATACAAGGCAAGAAGCTCACAAACCACAGTGCTCGCAAAACTTTGGTGAAGAAACTGAAAGCTGCAAATCAACCGAGGTCAGCGATTATCGGCGAGACAGGCCATACCAATGAAAGGTCCCTTGCAGATTATGAAGAAGGCGATGACAAAGAACAGCGACTCATTTGTTCAATCATCAGTGCAGAGTGTGCAACGGCACAATCCAGGAGAGTTCGTCAACCGCTTGAAAGATTAGATGCTGTAAACACAGCTGTGGCGAACACTTTCCTCATGAATAATGAAAGTGTTTCAGGTGGTGAGTTGTTCGAGCGTGTCGCAGTTGCCGACTATTTGACTGAGAAAGAAGCTTCCTTTTACATGTATCAGCTGCTCCAAGGATTGCAATACATGCATAACAAGAACATCGTGCACCTGGATATTAAGCCAGAAAACATCATGTGCGTTAGCAAAGACAGCTGGGATATCAAACTGATTGACTTTGGATCAGCGCAAGAGCTTGTGCCTGGAGTACGAATGAAAGCACTCAAAAGAACTCCTGAGTACATGGCCCCTGAAGCAGTGAATTCCGAAGCTATTTCATTGGCAACGGATATGTGGAGTGTTGGCGTTGTAGTCTACATCTTACTAAGCGGTTTATCGCCGTTCCTTGGAGACGACGACAATGAAACAGTTACCAACGTCACTGCTGCTGACTGGGACTTTGATGACGAAGTCTTCGACGTCATTTCTGACCAAGCGAAGGATTTTATTTCCAAGCTGTTGGTAAAAAATCCTAGGGAACGTATCACAGTGGCTCAAAGCCTTCAACACAACTGGATGAAGGAAAGTGCCTCAGCAAATGCATTTAAAATTGATGCAAGGAAGTTAAGGCAGTTTTTGGCCAAAAGAAGATGGCAGAAAGCTGTCAATGCCATCGTGGCCGTTCGTCGTTTGTCAAGCCTCAAGCCTTCCATGACCGGAAAGAGCAGGCCATCTGTCGCACCATCCTTAACAACCGTGCCTCCTGAAAAGGAAGACCAAATAACTGAGGAATTCAAGAATGAACAAGAACGGAACGTAGATGATCAGAACGTTACTCCTCCTGAAATCAATCTACGTGGTCCCAGGGCAATGGAGGCTTATAACAAGGCTCTTACTGAAGGCAAAACTCGTCTAAAAAGGATTCCGATTATGTTGATTGGACAGGAACGTTCAGGAAAAACCTGCCTGAAGAAGTCTCTGCAGGGATTACGATTCAACCCAAAAGAAGATAGCACTGTTGGGATAGATGTTGATCCATCGCACTTCAAAGTAACCACCGAGATTTGGAAGGCAGGGAAGATGGATCAAGCAGCAAACAGAGAGGAGATGGCTACTTCTTTTGAGCATCGTGTAGCTCGCGTAGTTGTTGAAAATCTAAGGGAACAAGAATTGACTTCTAAAGTGAAGATTGTTAACAAATTGAAACTTCGCAAAAGTGTAAGTGAAAGCAATGAAATCCCTGCAATCAATCATGATCAGGTTGGCTCGTCTGCAGATTCGTTTTCAACTACACAAATTGAAGCAGTAGAAGATTATGCAGGTTCTTTGAACTCATCGGGTGTAACCACAGATAATTATCTGACCGAGACGAAAGCCAGAGATAACAGTGTTTTCCCGGGAATGATACCAAAAGAGATAGAAACGTTGATTAGGGAACTTGGAGGTAGAGTTGACAAGATGGAAAGTGAGGATTACCTGTATTCGGTTTTGTGGGATTTCGCCGGAGAATCAGTTTATTACGAGACCCATCAACTGTTTCTGACGTCCAGGGCAGTCTACCTTTTGGTTTATGACCTAAGCCGGGATCCTGAAAAACTTGCACAGCCCGTGGAAAAGCAAGGAGTCTTCGGAAAAATTAAAGAGAAGTCATGTACGAAAACTAACGTCGACTATCTAGACTACTGGATGACCTCAGTTTCCTCACAATCCAGTCGAATTGAAGATCACAATTTGTACTCAGCTCCAACATACACAGTTCTGCCAAAGACACTTCCTCCTGTCTTCTTGGTGTGTACGCATTCTGACAAACCTTTTGGTGGAAAAGATCCTTTCGAACTGGCCATTAATTTGTACGGCTCCTTGGAAACAAAACCATATAGCTCACAACTATACGATGATGTGTTTGTTGTGGATAACACTAAATCAGGTCTGCAAATGGAGTGCTCAGAAGTGCAGCGTTTGAGAAAATGTATTTTAGACGTAATGAAGGAGCTACCACATGCGAATGAATATATCCCAATCAAGTGGTTAAGGTATGAAAAAGCGCTAGAGGTCGTACTGGATGAGGGCCATAAAAGGATCACTTTTGAGCACGCCAGACGGATCGCCTCCGAAGTCTGTCAAATTCATGATCATCAAGAGTTTGTAACAGTTCTTGACTTTTTGCACGATCAGAGAATTGTAATACATTTTGATGACAATGTTGAGCTAAACAAATTAGTTGTTTTGGATCCCCAGTGGTTGATCGATGTGTTCAAAACAGTAATAACTGTTAAGCGTTATGACCGTATGGAAAAGAGACTTAAGGAGTTGTGGCTTAAGCTTGAAAGAGAAGGAATTCTGGAAGAAAAACTCCTCAGGCATATGTGGGGTTCACTAGCCCAGGAACATCACACCTTTGAAAGCCTCATCGCAATCATGGAGAAGTTCAGCTTGTTGTGCTCTTGGTCTTCATCTGATGAGCCATTTAGTAAGAAATATCTGGTGCCGTCCATGTTGAGATGGTATCCTTCAGAGGAGATCACCAAGTTGATTAGCTCAGCAAGACTGCCCTCCCTTTTCGTCAAGTTTGAATCTGGCCAATCTCCATCCAACCTGTTTCCACGACTTGTGGTTCAGTTCCTTCAGTGGGGGAGAAAGAAATTTTGGAGCACAGTGAATCCTCAGCTGTATAAGAATTTCGCCAGATTTTACACTAAAGACGAAAACTGTTCAGTGGTACTCTTATGTCATTCCTCCTTGATTGAAGTCGTTGTTCATGGAGTGAATGTTCGTTCGCTGAAGGACGACTTGCAGGCAAATTTAGGCAACTCGCCCGCAGATCAACACGATTCATTTGAAGTTTTCTGTGCTCGTGAGGTCTTCAGACAGCTTGTGTTGTTGCTGGAGTGCTTGCGTAAAGAGTTTTGTTGGTTAAAGAGAATGAAATATCAAGCCGGGGCGATTTGTCCGACAACAACCGACGCGATTAGTGGCAGAATCTTATGCAATCGAAGAGAGAGAGAAGACAAGACACTTGCTCTTCCTGGCAATGTTGCTGAATCACTAGTATCGCCGTCATGTAATCCAAAAGAAATTGTACTTCAACTGAAGCAAAACCTACAGTTGGACCACACGGATTTGAAGCAACCCACCCCGGAAACAAAAAACATGATCCGTTGTCTCGCGGAAACAGCTAAGTATTCAAAAAGGATCGATGTTGTTAAACACCTGAGAGAAATCACACCAGCAGGGACAACTGGTCCATTGTTGCCTGGTAAACTTGATATTTGTGATATCCCAAGAACGAATTGGAGAGATCTTACAGTAGATTTGACCGTAGGAGGCCGGTGGAAAGTTGTCGCGGACAGACTTGGCTTAAGAGGAAGTGAGATCGAATTTCTTGATGAGAGATATCGGAATCCCAGTGAACCTACATTGGAGTATGGGGCTCGTCGTCATGGCATGAATGTGGATGATCTGTACGATGTGTTGACTGAGTGTGAGATGCCAATGCTGGCTGATATTTTGTGA

Transcript

chr10Alt.g21650.t1

TTCGTCGGAGTCCGTGCTGAAGTAAAAACATGGAGAGACTTTTCGAAAGTTTGAATGCCATATTTGAGGATCCTGCTTACAGTAATGTCAGGAACAAAATTTTTCCAGCCGCGGAAAAAGACTTGGAACTAGAACCCGGGGCTCCTGTGACACTGAAATCTTCTCCATTGGAAGACGCTTATGATGTCCATGAGGAAATCGGAAAAGGCAAATTTGGCGTTGTGAGGAAAGTTACACAACGCTCCTCCGAGAAATTGTTCGCTGCTAAGTACATCACTCTACGCTCGATAAGCAGCGGTTCATCGCATGAAGACATTCTACACGAAATAAGCATCATGAATCAGCTACACCATAAAAGGCTTGTGGGATTGATTGATGCCTTTGAGGCGCCGGGAAAAATCATCATGATAATGGAATTTTCTTCGCCGAGATCCGTGAGAAAGATGGTTACGAGTCAGTACGAACCTGACAGTTTACGAGTTATGTTGGCGTCATTGGACCGACACCTGAGAGAAAAGGATGCTGCCTTCTCAATAGCGATGGATATCGAGTTTTCCAACAGCAGAAAAGAACTTGAAGGAAAAGCAAGTCTTCTACGTCAAGAAGGTTTCGGAAAAAGGCCAAACGCTGCAAAGGCACACACCTCTCAAGACGAAGAGTTGTTGTGGTCCAAAGGAGTACTTGGAAGCCATTCTTCACAGTCTTTGACACAGACAATGTGGTTCTTGCTCATCCAGCACTTTGTTTTGAATCGCAATTATGCGCATGTTCAATTCCGGATACAATCGGATACCAAACCATTTGAATATGCTGCGTGTGGACTCGAAAATTTTCGCATCCGCAAAAAAATATTTGCGGAAAAAAAAGTTTCCGGATACGTGTGGACATGGCCTAGGCGTCAAAGAATGGGCGTCAACAGCATTAATTCCATTATGAAGAATATGGCAAGTCAAGCAGACATACAAGGCAAGAAGCTCACAAACCACAGTGCTCGCAAAACTTTGGTGAAGAAACTGAAAGCTGCAAATCAACCGAGGTCAGCGATTATCGGCGAGACAGGCCATACCAATGAAAGGTCCCTTGCAGATTATGAAGAAGGCGATGACAAAGAACAGCGACTCATTTGTTCAATCATCAGTGCAGAGTGTGCAACGGCACAATCCAGGAGAGTTCGTCAACCGCTTGAAAGATTAGATGCTGTAAACACAGCTGTGGCGAACACTTTCCTCATGAATAATGAAAGTGTTTCAGGTGGTGAGTTGTTCGAGCGTGTCGCAGTTGCCGACTATTTGACTGAGAAAGAAGCTTCCTTTTACATGTATCAGCTGCTCCAAGGATTGCAATACATGCATAACAAGAACATCGTGCACCTGGATATTAAGCCAGAAAACATCATGTGCGTTAGCAAAGACAGCTGGGATATCAAACTGATTGACTTTGGATCAGCGCAAGAGCTTGTGCCTGGAGTACGAATGAAAGCACTCAAAAGAACTCCTGAGTACATGGCCCCTGAAGCAGTGAATTCCGAAGCTATTTCATTGGCAACGGATATGTGGAGTGTTGGCGTTGTAGTCTACATCTTACTAAGCGGTTTATCGCCGTTCCTTGGAGACGACGACAATGAAACAGTTACCAACGTCACTGCTGCTGACTGGGACTTTGATGACGAAGTCTTCGACGTCATTTCTGACCAAGCGAAGGATTTTATTTCCAAGCTGTTGGTAAAAAATCCTAGGGAACGTATCACAGTGGCTCAAAGCCTTCAACACAACTGGATGAAGGAAAGTGCCTCAGCAAATGCATTTAAAATTGATGCAAGGAAGTTAAGGCAGTTTTTGGCCAAAAGAAGATGGCAGAAAGCTGTCAATGCCATCGTGGCCGTTCGTCGTTTGTCAAGCCTCAAGCCTTCCATGACCGGAAAGAGCAGGCCATCTGTCGCACCATCCTTAACAACCGTGCCTCCTGAAAAGGAAGACCAAATAACTGAGGAATTCAAGAATGAACAAGAACGGAACGTAGATGATCAGAACGTTACTCCTCCTGAAATCAATCTACGTGGTCCCAGGGCAATGGAGGCTTATAACAAGGCTCTTACTGAAGGCAAAACTCGTCTAAAAAGGATTCCGATTATGTTGATTGGACAGGAACGTTCAGGAAAAACCTGCCTGAAGAAGTCTCTGCAGGGATTACGATTCAACCCAAAAGAAGATAGCACTGTTGGGATAGATGTTGATCCATCGCACTTCAAAGTAACCACCGAGATTTGGAAGGCAGGGAAGATGGATCAAGCAGCAAACAGAGAGGAGATGGCTACTTCTTTTGAGCATCGTGTAGCTCGCGTAGTTGTTGAAAATCTAAGGGAACAAGAATTGACTTCTAAAGTGAAGATTGTTAACAAATTGAAACTTCGCAAAAGTGTAAGTGAAAGCAATGAAATCCCTGCAATCAATCATGATCAGGTTGGCTCGTCTGCAGATTCGTTTTCAACTACACAAATTGAAGCAGTAGAAGATTATGCAGGTTCTTTGAACTCATCGGGTGTAACCACAGATAATTATCTGACCGAGACGAAAGCCAGAGATAACAGTGTTTTCCCGGGAATGATACCAAAAGAGATAGAAACGTTGATTAGGGAACTTGGAGGTAGAGTTGACAAGATGGAAAGTGAGGATTACCTGTATTCGGTTTTGTGGGATTTCGCCGGAGAATCAGTTTATTACGAGACCCATCAACTGTTTCTGACGTCCAGGGCAGTCTACCTTTTGGTTTATGACCTAAGCCGGGATCCTGAAAAACTTGCACAGCCCGTGGAAAAGCAAGGAGTCTTCGGAAAAATTAAAGAGAAGTCATGTACGAAAACTAACGTCGACTATCTAGACTACTGGATGACCTCAGTTTCCTCACAATCCAGTCGAATTGAAGATCACAATTTGTACTCAGCTCCAACATACACAGTTCTGCCAAAGACACTTCCTCCTGTCTTCTTGGTGTGTACGCATTCTGACAAACCTTTTGGTGGAAAAGATCCTTTCGAACTGGCCATTAATTTGTACGGCTCCTTGGAAACAAAACCATATAGCTCACAACTATACGATGATGTGTTTGTTGTGGATAACACTAAATCAGGTCTGCAAATGGAGTGCTCAGAAGTGCAGCGTTTGAGAAAATGTATTTTAGACGTAATGAAGGAGCTACCACATGCGAATGAATATATCCCAATCAAGTGGTTAAGGTATGAAAAAGCGCTAGAGGTCGTACTGGATGAGGGCCATAAAAGGATCACTTTTGAGCACGCCAGACGGATCGCCTCCGAAGTCTGTCAAATTCATGATCATCAAGAGTTTGTAACAGTTCTTGACTTTTTGCACGATCAGAGAATTGTAATACATTTTGATGACAATGTTGAGCTAAACAAATTAGTTGTTTTGGATCCCCAGTGGTTGATCGATGTGTTCAAAACAGTAATAACTGTTAAGCGTTATGACCGTATGGAAAAGAGACTTAAGGAGTTGTGGCTTAAGCTTGAAAGAGAAGGAATTCTGGAAGAAAAACTCCTCAGGCATATGTGGGGTTCACTAGCCCAGGAACATCACACCTTTGAAAGCCTCATCGCAATCATGGAGAAGTTCAGCTTGTTGTGCTCTTGGTCTTCATCTGATGAGCCATTTAGTAAGAAATATCTGGTGCCGTCCATGTTGAGATGGTATCCTTCAGAGGAGATCACCAAGTTGATTAGCTCAGCAAGACTGCCCTCCCTTTTCGTCAAGTTTGAATCTGGCCAATCTCCATCCAACCTGTTTCCACGACTTGTGGTTCAGTTCCTTCAGTGGGGGAGAAAGAAATTTTGGAGCACAGTGAATCCTCAGCTGTATAAGAATTTCGCCAGATTTTACACTAAAGACGAAAACTGTTCAGTGGTACTCTTATGTCATTCCTCCTTGATTGAAGTCGTTGTTCATGGAGTGAATGTTCGTTCGCTGAAGGACGACTTGCAGGCAAATTTAGGCAACTCGCCCGCAGATCAACACGATTCATTTGAAGTTTTCTGTGCTCGTGAGGTCTTCAGACAGCTTGTGTTGTTGCTGGAGTGCTTGCGTAAAGAGTTTTGTTGGTTAAAGAGAATGAAATATCAAGCCGGGGCGATTTGTCCGACAACAACCGACGCGATTAGTGGCAGAATCTTATGCAATCGAAGAGAGAGAGAAGACAAGACACTTGCTCTTCCTGGCAATGTTGCTGAATCACTAGTATCGCCGTCATGTAATCCAAAAGAAATTGTACTTCAACTGAAGCAAAACCTACAGTTGGACCACACGGATTTGAAGCAACCCACCCCGGAAACAAAAAACATGATCCGTTGTCTCGCGGAAACAGCTAAGTATTCAAAAAGGATCGATGTTGTTAAACACCTGAGAGAAATCACACCAGCAGGGACAACTGGTCCATTGTTGCCTGGTAAACTTGATATTTGTGATATCCCAAGAACGAATTGGAGAGATCTTACAGTAGATTTGACCGTAGGAGGCCGGTGGAAAGTTGTCGCGGACAGACTTGGCTTAAGAGGAAGTGAGATCGAATTTCTTGATGAGAGATATCGGAATCCCAGTGAACCTACATTGGAGTATGGGGCTCGTCGTCATGGCATGAATGTGGATGATCTGTACGATGTGTTGACTGAGTGTGAGATGCCAATGCTGGCTGATATTTTGTGACCTGAGGTCTGCGTAACAGTTCTTGTTGGAGCCAGCAGCTGTTTGAACCACTGATTTTGAGGACGCCTCTTCAGTGATTTGACTGCTGGGTTAGTTTTGCACGTTTTTTTCGATGCAAACTATCCGTCCTTCAGTATTCTTTCAGTTACATTTTATTAAAAAAAAGTAACTGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O02827	Myosin light chain kinase, smooth muscle (Fragment) OS=Ovis aries OX=9940 GN=MYLK PE=2 SV=1
P29294	Myosin light chain kinase, smooth muscle OS=Oryctolagus cuniculus OX=9986 GN=MYLK PE=1 SV=2
Q28824	Myosin light chain kinase, smooth muscle OS=Bos taurus OX=9913 GN=MYLK PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16095 all species →	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR032171 all species →	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR013762 all species →	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011010 all species →	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000488 all species →	Domain	Death domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24342 all species →	SERINE/THREONINE-PROTEIN KINASE 17	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0043065 all species →	Biological Process	positive regulation of apoptotic process	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006310 all species →	Biological Process	DNA recombination	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g21650.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.