Detailed information of g21806.t1 in Acropora digitifera

Genomic Location: chr10Alt:13322046...13329694
NR annotation: XP_044167442.1, E3 ubiquitin-protein ligase BRE1-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17919
all species →		RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921
all species →		Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041577
all species →		DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR003034
all species →		DomainSAP domainInterproscan
IPR036361
all species →		Homologous_superfamilySAP domain superfamilyInterproscan
IPR041588
all species →		DomainIntegrase zinc-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34072
all species →		ENZYMATIC POLYPROTEIN-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for g21806.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g21806.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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