Detailed information of g22.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022791316.1, piggyBac transposable element-derived protein 4-like isoform X1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96DM1PiggyBac transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=PGBD4 PE=1 SV=3
Q8N328PiggyBac transposable element-derived protein 3 OS=Homo sapiens OX=9606 GN=PGBD3 PE=1 SV=3
P0DP91Chimeric ERCC6-PGBD3 protein OS=Homo sapiens OX=9606 GN=ERCC6 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01212Beta_elim_lyaseBeta-eliminating lyaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF03366YEATSYEATS familyDomainInterproscan
PF17793AHDANC1 homology domain (AHD)DomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00168C2C2 domainDomainInterproscan
PF06041DUF924Bacterial protein of unknown function (DUF924)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR011166FamilyBeta-eliminating lyase familyInterproscan
IPR001597DomainAromatic amino acid beta-eliminating lyase/threonine aldolaseInterproscan
IPR008276FamilyConcentrative nucleoside transporterInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR044539FamilyPachytene checkpoint protein 2-likeInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005033FamilyYEATSInterproscan
IPR052790FamilyYEATS domain-containingInterproscan
IPR040930DomainAF-9, ANC1 homology domainInterproscan
IPR038704Homologous_superfamilyYEATS superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR000008DomainC2 domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR010323FamilyProtein of unknown function DUF924Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32325BETA-ELIMINATING LYASE-LIKE PROTEIN-RELATEDInterproscan
PTHR10590SODIUM/NUCLEOSIDE COTRANSPORTERInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45991PACHYTENE CHECKPOINT PROTEIN 2Interproscan
PTHR47827AHD DOMAIN-CONTAINING PROTEINInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR10024SYNAPTOTAGMINInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009072Biological Processaromatic amino acid metabolic processInterproscan
GO:0016830Molecular Functioncarbon-carbon lyase activityInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0005337Molecular Functionnucleoside transmembrane transporter activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015293Molecular Functionsymporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:1901642Biological Processnucleoside transmembrane transportInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0007131Biological Processreciprocal meiotic recombinationInterproscan
GO:0051598Biological Processmeiotic recombination checkpoint signalingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0008023Cellular Componenttranscription elongation factor complexInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0070577Molecular Functionlysine-acetylated histone bindingInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0001786Molecular Functionphosphatidylserine bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0014059Biological Processregulation of dopamine secretionInterproscan
GO:0017156Biological Processcalcium-ion regulated exocytosisInterproscan
GO:0017158Biological Processregulation of calcium ion-dependent exocytosisInterproscan
GO:0030276Molecular Functionclathrin bindingInterproscan
GO:0070382Cellular Componentexocytic vesicleInterproscan
GO:0071277Biological Processcellular response to calcium ionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23313TEN1; CST complex subunit TEN1-Chromosome and associated proteinsko03036deepkoala
DNA replication proteinsko03032deepkoala

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