Detailed information of g220.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047137928.1, protein gustavus [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q96A44SPRY domain-containing SOCS box protein 4 OS=Homo sapiens OX=9606 GN=SPSB4 PE=1 SV=1
Q8R5B6SPRY domain-containing SOCS box protein 4 OS=Mus musculus OX=10090 GN=Spsb4 PE=1 SV=1
A1Z6E0Protein gustavus OS=Drosophila melanogaster OX=7227 GN=gus PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SOCS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF07525SOCS_boxSOCS boxDomainInterproscan
PF00622SPRYSPRY domainFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF02221E1_DerP2_DerF2ML domainDomainInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan
PF00702Hydrolasehaloacid dehalogenase-like hydrolaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR051279FamilyProtein Phosphatase 1 Regulatory and Actin Interaction ProteinInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR050672FamilyF-box/SPRY and SOCS box protein familiesInterproscan
IPR001496DomainSOCS box domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR003877DomainSPRY domainInterproscan
IPR052084FamilySpliceosome-associated SF3B4 subunitInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR034158DomainSF3B4, RNA recognition motif 1Interproscan
IPR034159DomainSF3B4, RNA recognition motif 2Interproscan
IPR003172DomainMD-2-related lipid-recognition domainInterproscan
IPR036846Homologous_superfamilyGM2-AP, lipid-recognition domain superfamilyInterproscan
IPR028996FamilyGanglioside GM2 activatorInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR051830FamilyNeurogenic locus notch homologInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR000217FamilyTubulinInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan
IPR002453FamilyBeta tubulinInterproscan
IPR000195DomainRab-GAP-TBC domainInterproscan
IPR050302FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR023943FamilyEnolase-phosphatase E1Interproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR006439FamilyHAD hydrolase, subfamily IAInterproscan
IPR035992Homologous_superfamilyRicin B-like lectinsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45632LD33804PInterproscan
PTHR24112LEUCINE-RICH REPEAT, ISOFORM F-RELATEDInterproscan
PTHR12245SPRY DOMAIN CONTAINING SOCS BOX PROTEINInterproscan
PTHR48030SPLICING FACTOR 3B SUBUNIT 4Interproscan
PTHR17357GM2 GANGLIOSIDE ACTIVATOR PROTEINInterproscan
PTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11588TUBULINInterproscan
PTHR47219RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan
PTHR20371ENOLASE-PHOSPHATASE E1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0030027Cellular ComponentlamellipodiumInterproscan
GO:0034315Biological Processregulation of Arp2/3 complex-mediated actin nucleationInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0048026Biological Processpositive regulation of mRNA splicing, via spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006689Biological Processganglioside catabolic processInterproscan
GO:0006869Biological Processlipid transportInterproscan
GO:0008047Molecular Functionenzyme activator activityInterproscan
GO:0009898Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0019509Biological ProcessL-methionine salvage from methylthioadenosineInterproscan
GO:0043874Molecular Functionacireductone synthase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09880mtnC, ENOPH1; enolase-phosphatase E1EC:3.1.3.77
Membrane traffickingko04131deepkoala
Spliceosomeko03041deepkoala
Exosomeko04147deepkoala
Cysteine and methionine metabolismko00270deepkoala

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