Gene detail

Detailed information of g221.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_046579763.1, myeloid leukemia factor 2-like isoform X3 [Haliotis rubra]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P58340	Myeloid leukemia factor 1 OS=Homo sapiens OX=9606 GN=MLF1 PE=1 SV=1
Q5R4T3	Myeloid leukemia factor 1 OS=Pongo abelii OX=9601 GN=MLF1 PE=2 SV=1
Q9QWV4	Myeloid leukemia factor 1 OS=Mus musculus OX=10090 GN=Mlf1 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13359	DDE_Tnp_4	DDE superfamily endonuclease	Domain	Interproscan
PF07716	bZIP_2	Basic region leucine zipper	Coiled-coil	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00083	Sugar_tr	Sugar (and other) transporter	Family	Interproscan
PF04898	Glu_syn_central	Glutamate synthase central domain	Domain	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF01852	START	START domain	Domain	Interproscan
PF05478	Prominin	Prominin	Family	Interproscan
PF10248	Mlf1IP	Myelodysplasia-myeloid leukemia factor 1-interacting protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027806	Domain	Harbinger transposase-derived nuclease domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR040223	Family	PAR basic leucine zipper protein	Interproscan
IPR051320	Family	Viral Replication and Maturation Polyprotein	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR005828	Family	Major facilitator, sugar transporter-like	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR006982	Domain	Glutamate synthase, central-N	Interproscan
IPR050711	Family	Electron transfer and nitrogen metabolism enzyme	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR002913	Domain	START domain	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR023393	Homologous_superfamily	START-like domain superfamily	Interproscan
IPR008795	Family	Prominin	Interproscan
IPR019376	Family	Myeloid leukemia factor	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR044635	Family	Ubiquitin carboxyl-terminal hydrolase 14-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22930	UNCHARACTERIZED	Interproscan
PTHR11988	THYROTROPH EMBRYONIC FACTOR RELATED	Interproscan
PTHR33064	POL PROTEIN	Interproscan
PTHR24064	SOLUTE CARRIER FAMILY 22 MEMBER	Interproscan
PTHR11938	FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE	Interproscan
PTHR47117	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan
PTHR22730	PROMININ PROM PROTEIN	Interproscan
PTHR13105	MYELOID LEUKEMIA FACTOR	Interproscan
PTHR43982	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0006807	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0015930	Molecular Function	glutamate synthase activity	Interproscan
GO:0006537	Biological Process	glutamate biosynthetic process	Interproscan
GO:0016040	Molecular Function	glutamate synthase (NADH) activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0019676	Biological Process	ammonia assimilation cycle	Interproscan
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061136	Biological Process	regulation of proteasomal protein catabolic process	Interproscan
GO:0070628	Molecular Function	proteasome binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09057	HLF; hepatic leukemia factor	-	Transporters	ko02000	deepkoala
K09057	HLF; hepatic leukemia factor	-	Transcription factors	ko03000	deepkoala