Detailed information of g223.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_032222404.2, rho GTPase-activating protein 21-B [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q71M21Rho GTPase-activating protein 21-B OS=Xenopus laevis OX=8355 GN=arhgap21-b PE=2 SV=1
Q6DFG0Rho GTPase-activating protein 21-A OS=Xenopus laevis OX=8355 GN=arhgap21-a PE=2 SV=1
A2RUV4Rho GTPase-activating protein 21 OS=Xenopus tropicalis OX=8364 GN=arhgap21 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF15410PH_9Pleckstrin homology domainDomainInterproscan
PF17820PDZ_6PDZ domainDomainInterproscan
PF00083Sugar_trSugar (and other) transporterFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00150CellulaseCellulase (glycosyl hydrolase family 5)DomainInterproscan
PF06544Prp3_CSmall nuclear ribonucleoprotein Prp3, C-terminal domainDomainInterproscan
PF08572PRP3pre-mRNA processing factor 3 domainDomainInterproscan
PF02037SAPSAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR001605DomainPleckstrin homology domain, spectrin-typeInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR041681DomainPleckstrin homology domain 9Interproscan
IPR041489DomainPDZ domain 6Interproscan
IPR005828FamilyMajor facilitator, sugar transporter-likeInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR005829Conserved_siteSugar transporter, conserved siteInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR045164FamilyRNA-binding region-containing protein RBM41/RNPC3Interproscan
IPR024705FamilySpermatogenesis-associated protein 20Interproscan
IPR008928Homologous_superfamilySix-hairpin glycosidase superfamilyInterproscan
IPR051993FamilyGlycosyltransferase 8Interproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR052066FamilyGlycosphingolipid Hydrolyzing EnzymesInterproscan
IPR001547DomainGlycoside hydrolase, family 5Interproscan
IPR010541DomainSmall nuclear ribonucleoprotein Prp3, C-terminal domainInterproscan
IPR027104FamilyU4/U6 small nuclear ribonucleoprotein Prp3Interproscan
IPR013881DomainPre-mRNA-splicing factor 3 domainInterproscan
IPR021717FamilyNucleoporin Nup120/160Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR003034DomainSAP domainInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23175PDZ DOMAIN-CONTAINING PROTEINInterproscan
PTHR24064SOLUTE CARRIER FAMILY 22 MEMBERInterproscan
PTHR16105UNCHARACTERIZEDInterproscan
PTHR42899SPERMATOGENESIS-ASSOCIATED PROTEIN 20Interproscan
PTHR46012IP22168PInterproscan
PTHR31308-Interproscan
PTHR14212U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATEDInterproscan
PTHR21286NUCLEAR PORE COMPLEX PROTEIN NUP160Interproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005543Molecular Functionphospholipid bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0030626Molecular FunctionU12 snRNA bindingInterproscan
GO:0097157Molecular Functionpre-mRNA intronic bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0016266Biological ProcessO-glycan processingInterproscan
GO:0035252Molecular FunctionUDP-xylosyltransferase activityInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0071704Biological Processobsolete organic substance metabolic processInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12843PRPF3, PRP3; U4/U6 small nuclear ribonucleoprotein PRP3-Membrane traffickingko04131deepkoala
Spliceosomeko03041deepkoala

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