Gene detail

Detailed information of g223.t2 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_032222404.2, rho GTPase-activating protein 21-B [Nematostella vectensis]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q71M21	Rho GTPase-activating protein 21-B OS=Xenopus laevis OX=8355 GN=arhgap21-b PE=2 SV=1
Q6DFG0	Rho GTPase-activating protein 21-A OS=Xenopus laevis OX=8355 GN=arhgap21-a PE=2 SV=1
A2RUV4	Rho GTPase-activating protein 21 OS=Xenopus tropicalis OX=8364 GN=arhgap21 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000046 (this species only)
Orthogroup (gene family)	OG0002824 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF15410 all species →	PH_9	Pleckstrin homology domain	Domain	Interproscan
PF17820 all species →	PDZ_6	PDZ domain	Domain	Interproscan
PF13843 all species →	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR041681 all species →	Domain	Pleckstrin homology domain 9	Interproscan
IPR001605 all species →	Domain	Pleckstrin homology domain, spectrin-type	Interproscan
IPR041489 all species →	Domain	PDZ domain 6	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR029526 all species →	Domain	PiggyBac transposable element-derived protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23175 all species →	PDZ DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46599 all species →	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005543 all species →	Molecular Function	phospholipid binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20315	ARHGAP21_23; Rho GTPase-activating protein 21/23	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.