Detailed information of g224.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3144790.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q804Q2Melanopsin-B OS=Gadus morhua OX=8049 GN=opn4b PE=2 SV=1
P31356Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2
Q5R4Q65-hydroxytryptamine receptor 2A OS=Pongo pygmaeus OX=9600 GN=HTR2A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02188GoLocoGoLoco motifMotifInterproscan
PF21022Rap-GAP_dimerRap/Ran-GAP protein dimerization domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00791ZU5ZU5 domainFamilyInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF17809UPA_2UPA domainDomainInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF03645Tctex-1Tctex-1 familyFamilyInterproscan
PF02213GYFGYF domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035974Homologous_superfamilyRap/Ran-GAP superfamilyInterproscan
IPR050989FamilyRap1/Ran GTPase-activatingInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR003109Conserved_siteGoLoco motifInterproscan
IPR000331DomainRap/Ran-GAP domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR000906DomainZU5 domainInterproscan
IPR000488DomainDeath domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR051165FamilyMultifunctional Ankyrin Repeat Domain-Containing ProteinInterproscan
IPR040745DomainAnkyrin, UPA domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR038586Homologous_superfamilyTctex-1-like superfamilyInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006028FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR005334FamilyDynein light chain Tctex-1 likeInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR051640FamilyGRB10-interacting GYFInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR035445Homologous_superfamilyGYF-like domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR003169DomainGYF domainInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15711RAP GTPASE-ACTIVATING PROTEINInterproscan
PTHR24123ANKYRIN REPEAT-CONTAININGInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR14445GRB10 INTERACTING GYF PROTEINInterproscan
PTHR24240OPSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0051056Biological Processregulation of small GTPase mediated signal transductionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030695Molecular FunctionGTPase regulator activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25722PRG3; proteoglycan 3-G protein-coupled receptorsko04030deepkoala
Signaling proteins-deepkoala

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