Detailed information of g225.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: EDO38607.1, predicted protein, partial [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JPN4Endoribonuclease ZC3H12A OS=Rattus norvegicus OX=10116 GN=Zc3h12a PE=2 SV=1
Q5D1E7Endoribonuclease ZC3H12A OS=Mus musculus OX=10090 GN=Zc3h12a PE=1 SV=2
A6QQJ8Ribonuclease ZC3H12A OS=Bos taurus OX=9913 GN=ZC3H12A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02466Tim17Tim17/Tim22/Tim23/Pmp24 familyFamilyInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF03107C1_2C1 domainDomainInterproscan
PF01363FYVEFYVE zinc fingerDomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF09068EF-hand_2EF handDomainInterproscan
PF09069EF-hand_3EF-handDomainInterproscan
PF00837T4_deiodinaseIodothyronine deiodinaseFamilyInterproscan
PF00437T2SSEType II/IV secretion system proteinFamilyInterproscan
PF00916Sulfate_transpSulfate permease familyFamilyInterproscan
PF02759RUNRUN domainFamilyInterproscan
PF11977RNase_Zc3h12aZc3h12a-like Ribonuclease NYN domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR046349Homologous_superfamilyC1-like domain superfamilyInterproscan
IPR051652FamilyMDM2/MDM4 and MUL1Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR004146DomainDC1Interproscan
IPR051944FamilyBEACH domain-containing proteinInterproscan
IPR000306DomainFYVE zinc fingerInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR050774FamilyKCMF1 and DystrophinInterproscan
IPR015153DomainEF-hand domain, type 1Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR015154DomainEF-hand domain, type 2Interproscan
IPR000643FamilyIodothyronine deiodinaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001482DomainType II/IV secretion system domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR011547DomainSLC26A/SulP transporter domainInterproscan
IPR001902FamilySLC26A/SulP transporterInterproscan
IPR037213Homologous_superfamilyRUN domain superfamilyInterproscan
IPR004012DomainRUN domainInterproscan
IPR051101FamilyZC3H12/N4BP1 Ribonuclease and RegulatorInterproscan
IPR021869DomainRibonuclease Zc3h12a-like, NYN domainInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13002C3ORF1 PROTEIN-RELATEDInterproscan
PTHR12183MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46108BLUE CHEESEInterproscan
PTHR12268E3 UBIQUITIN-PROTEIN LIGASE KCMF1Interproscan
PTHR11781IODOTHYRONINE DEIODINASEInterproscan
PTHR30258TYPE II SECRETION SYSTEM PROTEIN GSPE-RELATEDInterproscan
PTHR11814SULFATE TRANSPORTERInterproscan
PTHR12876N4BP1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0099536Biological Processsynaptic signalingInterproscan
GO:0004800Molecular Functionthyroxine 5'-deiodinase activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015116Molecular Functionsulfate transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0036464Cellular Componentcytoplasmic ribonucleoprotein granuleInterproscan
GO:0090502Biological Processobsolete RNA phosphodiester bond hydrolysis, endonucleolyticInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02652pilB; type IV pilus assembly protein PilB-Messenger RNA biogenesisko03019deepkoala
Bacterial motility proteinsko02035deepkoala

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