Detailed information of g22540.t1 in Montipora capitata

Genomic Location: Sc0001751:13685...17230
NR annotation: XP_015769232.1, PREDICTED: microprocessor complex subunit DGCR8-like [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6QR44Microprocessor complex subunit DGCR8 OS=Bos taurus OX=9913 GN=DGCR8 PE=2 SV=1
Q8WYQ5Microprocessor complex subunit DGCR8 OS=Homo sapiens OX=9606 GN=DGCR8 PE=1 SV=1
Q9EQM6Microprocessor complex subunit DGCR8 OS=Mus musculus OX=10090 GN=Dgcr8 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005453 (this species only)

 Pfam domain
No Pfam domain signature was detected for g22540.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR040375
all species →
FamilyMicroprocessor complex subunit DGCR8Interproscan
IPR001202
all species →
DomainWW domainInterproscan
IPR036020
all species →
Homologous_superfamilyWW domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13482
all species →
MICRORNA PROCESSOR COMPLEX SUBUNIT DGCR8Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003725
all species →
Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0020037
all species →
Molecular Functionheme bindingInterproscan
GO:0031053
all species →
Biological Processprimary miRNA processingInterproscan
GO:0042802
all species →
Molecular Functionidentical protein bindingInterproscan
GO:0070877
all species →
Cellular Componentmicroprocessor complexInterproscan
GO:0070878
all species →
Molecular Functionprimary miRNA bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g22540.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP