Detailed information of g228.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020602936.1, uncharacterized protein LOC110041954 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BG09Transmembrane protein 184B OS=Mus musculus OX=10090 GN=Tmem184b PE=2 SV=1
Q9Y519Transmembrane protein 184B OS=Homo sapiens OX=9606 GN=TMEM184B PE=1 SV=2
A2VDL9Transmembrane protein 184B OS=Bos taurus OX=9913 GN=TMEM184B PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF02578Cu-oxidase_4Multi-copper polyphenol oxidoreductase laccaseFamilyInterproscan
PF13374TPR_10Tetratricopeptide repeatRepeatInterproscan
PF13302Acetyltransf_3Acetyltransferase (GNAT) domainDomainInterproscan
PF16550RPN13_CUCH-binding domainDomainInterproscan
PF10699HAP2-GCS1Male gamete fusion factorDomainInterproscan
PF03619Solute_trans_aOrganic solute transporter OstalphaFamilyInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR024731DomainEGF domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003730FamilyMulti-copper polyphenol oxidoreductaseInterproscan
IPR011324Homologous_superfamilyCytotoxic necrotizing factor-like, catalyticInterproscan
IPR038371Homologous_superfamilyMulti-copper polyphenol oxidoreductase superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR042621FamilyTetratricopeptide repeat protein TTC23/TTC23LInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR000182DomainGNAT domainInterproscan
IPR044867DomainDEUBAD domainInterproscan
IPR006773FamilyProteasomal ubiquitin receptor Rpn13/ADRM1Interproscan
IPR038108Homologous_superfamilyRPN13, DEUBAD domain superfamilyInterproscan
IPR044868DomainRpn13/ADRM1, Pru domainInterproscan
IPR032368DomainRPN13, DEUBAD domainInterproscan
IPR016181Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR040326FamilyHAP2/GCS1Interproscan
IPR018928DomainGenerative cell specific-1/HAP2 domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR005178FamilyOrganic solute transporter subunit alpha/Transmembrane protein 184Interproscan
IPR026846FamilyE3 SUMO-protein ligase Nse2 (Mms21)Interproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR30616UNCHARACTERIZED PROTEIN YFIHInterproscan
PTHR14485TETRATRICOPEPTIDE REPEAT PROTEIN 23Interproscan
PTHR12225ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEINInterproscan
PTHR31764PROTEIN HAPLESS 2Interproscan
PTHR41694ENDOGENOUS RETROVIRUS GROUP K MEMBER POL PROTEINInterproscan
PTHR23423ORGANIC SOLUTE TRANSPORTER-RELATEDInterproscan
PTHR21330UNCHARACTERIZEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0016747Molecular Functionacyltransferase activity, transferring groups other than amino-acyl groupsInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008541Cellular Componentproteasome regulatory particle, lid subcomplexInterproscan
GO:0061133Molecular Functionendopeptidase activator activityInterproscan
GO:0070628Molecular Functionproteasome bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005215Molecular Functiontransporter activityInterproscan
GO:0006810Biological ProcesstransportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0016925Biological Processprotein sumoylationInterproscan
GO:0019789Molecular FunctionSUMO transferase activityInterproscan
GO:0030915Cellular ComponentSmc5-Smc6 complexInterproscan
GO:0061665Molecular FunctionSUMO ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24934TTC23; tetratricopeptide repeat protein 23-Cilium and associated proteinsko03037deepkoala

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