Detailed information of g22828.t1 in Montipora capitata

Genomic Location: Sc0001859:11377...12653
NR annotation: XP_044169062.1, cleavage and polyadenylation specificity factor subunit 2-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q10568Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 GN=CPSF2 PE=1 SV=1
Q9P2I0Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=9606 GN=CPSF2 PE=1 SV=2
O35218Cleavage and polyadenylation specificity factor subunit 2 OS=Mus musculus OX=10090 GN=Cpsf2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004914 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16661
all species →		Lactamase_B_6Metallo-beta-lactamase superfamily domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027075
all species →		FamilyCleavage and polyadenylation specificity factor subunit 2Interproscan
IPR036866
all species →		Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR001279
all species →		DomainMetallo-beta-lactamaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45922
all species →		CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005847
all species →		Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006378
all species →		Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006398
all species →		Biological ProcessmRNA 3'-end processing by stem-loop binding and cleavageInterproscan
GO:0098789
all species →		Biological Processobsolete pre-mRNA cleavage required for polyadenylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g22828.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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