Detailed information of g22898.t1 in Acropora digitifera

Genomic Location: chr10Alt:28726711...28736904
NR annotation: XP_044181156.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O70340Neuronal pentraxin-2 OS=Mus musculus OX=10090 GN=Nptx2 PE=1 SV=1
P47972Neuronal pentraxin-2 OS=Homo sapiens OX=9606 GN=NPTX2 PE=1 SV=2
P97738Neuronal pentraxin-2 OS=Rattus norvegicus OX=10116 GN=Nptx2 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00354
all species →		PentaxinPentaxin familyDomainInterproscan
PF00024
all species →		PAN_1PAN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051360
all species →		FamilyNeuronal Pentraxin and RelatedInterproscan
IPR001759
all species →		FamilyPentraxin-relatedInterproscan
IPR003609
all species →		DomainPAN/Apple domainInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19277
all species →		PENTRAXINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for g22898.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g22898.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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