Detailed information of g2291.t1 in Montipora capitata

Genomic Location: Sc0000034:29521...55134
NR annotation: XP_029187313.2, chromodomain-helicase-DNA-binding protein 4-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12873Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens OX=9606 GN=CHD3 PE=1 SV=3
Q14839Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2
A2A8L1Chromodomain-helicase-DNA-binding protein 5 OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF06461CHDII_SANT-likeCHD subfamily II, SANT-like domainDomainInterproscan
PF08074CHDCT2CHDCT2 (NUC038) domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF06465DUF1087CHD subfamily II, DUF1087DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR009463DomainDomain of unknown function DUF1087Interproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR009462DomainCHD subfamily II, SANT-like domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR012957DomainCHD, C-terminal 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45623CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

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