Genomic Location: Sc0000034:63857...77866
NR annotation: XP_029187316.2, chromodomain-helicase-DNA-binding protein 4-like isoform X4 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families
| CDS |
| g2292.t1 |
| Transcript |
| g2292.t1 |
| Protein |
| g2292.t1 |
| UniProt accession | Description |
|---|---|
| D3ZD32 | Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1 |
| A2A8L1 | Chromodomain-helicase-DNA-binding protein 5 OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1 |
| Q8TDI0 | Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens OX=9606 GN=CHD5 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001712 (this species only) |
| Ubiquitin family | E3|E3 activity RING|PHD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00628 all species → | PHD | PHD-finger | Domain | Interproscan |
| PF08073 all species → | CHDNT | CHDNT (NUC034) domain | Domain | Interproscan |
| PF00385 all species → | Chromo | Chromo (CHRromatin Organisation MOdifier) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019787 all species → | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR000953 all species → | Domain | Chromo/chromo shadow domain | Interproscan |
| IPR016197 all species → | Homologous_superfamily | Chromo-like domain superfamily | Interproscan |
| IPR012958 all species → | Domain | CHD, N-terminal | Interproscan |
| IPR023780 all species → | Domain | Chromo domain | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24102 all species → | PHD FINGER PROTEIN | Interproscan |
g2292.t1. This gene does have a gene model — the search simply returned no hit.g2292.t1.
