Gene detail

Detailed information of g2292.t1 in Montipora capitata

Genomic Location: Sc0000034:63857...77866
NR annotation: XP_029187316.2, chromodomain-helicase-DNA-binding protein 4-like isoform X4 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
D3ZD32	Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1
A2A8L1	Chromodomain-helicase-DNA-binding protein 5 OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1
Q8TDI0	Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens OX=9606 GN=CHD5 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00628	PHD	PHD-finger	Domain	Interproscan
PF08073	CHDNT	CHDNT (NUC034) domain	Domain	Interproscan
PF00385	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR000953	Domain	Chromo/chromo shadow domain	Interproscan
IPR016197	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR012958	Domain	CHD, N-terminal	Interproscan
IPR023780	Domain	Chromo domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24102	PHD FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-