Gene detail

Detailed information of g2306.t2 in Tripedalia maipoensis

Genomic Location: scaffold_11:16298522...16321681
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00145 all species →	DNA_methylase	C-5 cytosine-specific DNA methylase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001525 all species →	Family	C-5 cytosine methyltransferase	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR050750 all species →	Family	Cytosine-specific C5-methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46098 all species →	TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15336	TRDMT1, DNMT2; tRNA (cytosine38-C5)-methyltransferase	EC:2.1.1.204	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.