Detailed information of g239.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: MCH9704725.1, hydroxyphenylacetyl-CoA thioesterase PaaI [Pseudomonadota bacterium]
Species Calvadosia cruxmelitensis · all data for this species · gene families

 Sequence
Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P76084Acyl-coenzyme A thioesterase PaaI OS=Escherichia coli (strain K12) OX=83333 GN=paaI PE=1 SV=1
O28020Putative esterase AF_2264 OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=AF_2264 PE=3 SV=1
Q9RS06Putative esterase DR_2321 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) OX=243230 GN=DR_2321 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000134 (this species only)
Orthogroup (gene family)OG0001101 (this species only)
Orthogroup (gene family)OG0002285 (this species only)
Orthogroup (gene family)OG0004456 (this species only)
Orthogroup (gene family)OG0004600 (this species only)
Orthogroup (gene family)OG0005543 (this species only)
Orthogroup (gene family)OG0006641 (this species only)
Orthogroup (gene family)OG0008474 (this species only)
Orthogroup (gene family)OG0013780 (this species only)
Orthogroup (gene family)OG0025841 (this species only)
Orthogroup (gene family)OG0029698 (this species only)
Orthogroup (gene family)OG0029709 (this species only)
Orthogroup (gene family)OG0172487 (this species only)
Orthogroup (gene family)OG0173945 (this species only)
Orthogroup (gene family)OG0174340 (this species only)
Transcription factor familyHMG · all TF in this species
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07885
all species →
Ion_trans_2Ion channelFamilyInterproscan
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan
PF03061
all species →
4HBTThioesterase superfamilyDomainInterproscan
PF00505
all species →
HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013099
all species →
DomainPotassium channel domainInterproscan
IPR003280
all species →
FamilyTwo pore domain potassium channelInterproscan
IPR038774
all species →
FamilyCentrosomal protein CEP162-likeInterproscan
IPR042411
all species →
FamilyWD repeat-containing protein 27Interproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR003736
all species →
DomainPhenylacetic acid degradation-related domainInterproscan
IPR029069
all species →
Homologous_superfamilyHotDog domain superfamilyInterproscan
IPR006683
all species →
DomainThioesterase domainInterproscan
IPR052723
all species →
FamilyAcyl-coenzyme A thioesterase PaaIInterproscan
IPR011973
all species →
FamilyPhenylacetic acid degradation protein PaaDInterproscan
IPR009071
all species →
DomainHigh mobility group box domainInterproscan
IPR042477
all species →
FamilyHMG domain-containing protein 4Interproscan
IPR036910
all species →
Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11003
all species →
POTASSIUM CHANNEL, SUBFAMILY KInterproscan
PTHR33995
all species →
PROTEIN CBG18546Interproscan
PTHR34031
all species →
CENTROSOMAL PROTEIN OF 162 KDAInterproscan
PTHR44525
all species →
WD REPEAT-CONTAINING PROTEIN 27Interproscan
PTHR44281
all species →
SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGInterproscan
PTHR42856
all species →
ACYL-COENZYME A THIOESTERASE PAAIInterproscan
PTHR46584
all species →
HMG DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005267
all species →
Molecular Functionpotassium channel activityInterproscan
GO:0005887
all species →
Cellular Componentplasma membraneInterproscan
GO:0015271
all species →
Molecular Functionoutward rectifier potassium channel activityInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0022841
all species →
Molecular Functionpotassium ion leak channel activityInterproscan
GO:0030322
all species →
Biological Processstabilization of membrane potentialInterproscan
GO:0071805
all species →
Biological Processpotassium ion transmembrane transportInterproscan
GO:0005813
all species →
Cellular ComponentcentrosomeInterproscan
GO:0005814
all species →
Cellular ComponentcentrioleInterproscan
GO:0005879
all species →
Cellular Componentaxonemal microtubuleInterproscan
GO:0060271
all species →
Biological Processcilium assemblyInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0007099
all species →
Biological Processcentriole replicationInterproscan
GO:0016289
all species →
Molecular Functionacyl-CoA hydrolase activityInterproscan
GO:0016790
all species →
Molecular Functionthiolester hydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11298HMGXB4, HMG2L1; HMG domain-containing protein 4-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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