Detailed information of g242.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAA6800877.1, 3-ketoacyl-CoA thiolase (EC @ Acetyl-CoA acetyltransferase (EC [uncultured Thiotrichaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P45363Acetyl-CoA acetyltransferase OS=Thiocystis violacea OX=13725 GN=phaA PE=3 SV=1
P45369Acetyl-CoA acetyltransferase OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) OX=572477 GN=phaA PE=3 SV=2
Q9ZHI1Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK) OX=243365 GN=phaA PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08393DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan
PF12774AAA_6Hydrolytic ATP binding site of dynein motor regionDomainInterproscan
PF05536NeurochondrinNeurochondrinRepeatInterproscan
PF03747ADP_ribosyl_GHADP-ribosylglycohydrolaseFamilyInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF02803Thiolase_CThiolase, C-terminal domainDomainInterproscan
PF00108Thiolase_NThiolase, N-terminal domainDomainInterproscan
PF10203Pet191_NCytochrome c oxidase assembly protein PET191FamilyInterproscan
PF04051TRAPPTransport protein particle (TRAPP) componentFamilyInterproscan
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043157Homologous_superfamilyDynein heavy chain, AAA1 domain, small subdomainInterproscan
IPR013602DomainDynein heavy chain, linkerInterproscan
IPR035699DomainDynein heavy chain, hydrolytic ATP-binding dynein motor regionInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR043130Homologous_superfamilyCDP-alcohol phosphatidyltransferase, transmembrane domainInterproscan
IPR008709FamilyNeurochondrinInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR005502FamilyADP-ribosylation/Crystallin J1Interproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036705Homologous_superfamilyADP-ribosylation/Crystallin J1 superfamilyInterproscan
IPR002155FamilyThiolaseInterproscan
IPR016039Homologous_superfamilyThiolase-likeInterproscan
IPR020617DomainThiolase, C-terminalInterproscan
IPR020613Conserved_siteThiolase, conserved siteInterproscan
IPR020610Active_siteThiolase, active siteInterproscan
IPR020616DomainThiolase, N-terminalInterproscan
IPR018793FamilyCytochrome c oxidase assembly protein PET191Interproscan
IPR007194FamilyTransport protein particle (TRAPP) componentInterproscan
IPR024096Homologous_superfamilyNO signalling/Golgi transport ligand-binding domain superfamilyInterproscan
IPR016696FamilyTRAPP I complex, subunit 5Interproscan
IPR036036Homologous_superfamilySOCS box-like domain superfamilyInterproscan
IPR051983FamilyWD repeat and SOCS box domain-containing proteinInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001496DomainSOCS box domainInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR001680RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45703DYNEIN HEAVY CHAINInterproscan
PTHR13109NEUROCHONDRINInterproscan
PTHR45080CONTACTIN 5Interproscan
PTHR18919ACETYL-COA C-ACYLTRANSFERASEInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR28627CYTOCHROME C OXIDASE ASSEMBLY FACTOR 5Interproscan
PTHR2090241-2 PROTEIN ANTIGEN-RELATEDInterproscan
PTHR15622WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0030425Cellular ComponentdendriteInterproscan
GO:0031175Biological Processneuron projection developmentInterproscan
GO:0048168Biological Processregulation of neuronal synaptic plasticityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0008046Molecular Functionaxon guidance receptor activityInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0043025Cellular Componentneuronal cell bodyInterproscan
GO:0050808Biological Processsynapse organizationInterproscan
GO:0016747Molecular Functionacyltransferase activity, transferring groups other than amino-acyl groupsInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0033617Biological Processmitochondrial cytochrome c oxidase assemblyInterproscan
GO:0030008Cellular ComponentTRAPP complexInterproscan
GO:0048193Biological ProcessGolgi vesicle transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:1990070Cellular ComponentTRAPPI protein complexInterproscan
GO:1990071Cellular ComponentTRAPPII protein complexInterproscan
GO:1990072Cellular ComponentTRAPPIII protein complexInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17797COX18; mitochondrial inner membrane protein COX18-Exosomeko04147deepkoala
Mitochondrial biogenesisko03029deepkoala
Sphingolipid metabolismko00600deepkoala
Transportersko02000deepkoala

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