Detailed information of g243.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBE0494517.1, nucleotide sugar dehydrogenase [Thiomicrospira sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9RHD7UDP-N-acetyl-D-glucosamine 6-dehydrogenase OS=Pseudomonas aeruginosa OX=287 GN=wbpO PE=1 SV=1
Q04972UDP-N-acetyl-D-glucosamine 6-dehydrogenase OS=Salmonella typhi OX=90370 GN=wcdA PE=1 SV=1
P39861Protein CapL OS=Staphylococcus aureus OX=1280 GN=capL PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|UBC-like|UBC
Ubiquitin FamilyE2|UEV|UEV

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00254FKBP_CFKBP-type peptidyl-prolyl cis-trans isomeraseDomainInterproscan
PF00984UDPG_MGDP_dhUDP-glucose/GDP-mannose dehydrogenase family, central domainDomainInterproscan
PF03720UDPG_MGDP_dh_CUDP-glucose/GDP-mannose dehydrogenase family, UDP binding domainDomainInterproscan
PF02894GFO_IDH_MocA_COxidoreductase family, C-terminal alpha/beta domainDomainInterproscan
PF03721UDPG_MGDP_dh_NUDP-glucose/GDP-mannose dehydrogenase family, NAD binding domainDomainInterproscan
PF01408GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann foldFamilyInterproscan
PF01663PhosphodiestType I phosphodiesterase / nucleotide pyrophosphataseFamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF03571Peptidase_M49Peptidase family M49FamilyInterproscan
PF05207zf-CSLCSL zinc fingerDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF00130C1_1Phorbol esters/diacylglycerol binding domain (C1 domain)DomainInterproscan
PF10239DUF2465Protein of unknown function (DUF2465)FamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00179UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR046357Homologous_superfamilyPeptidyl-prolyl cis-trans isomerase domain superfamilyInterproscan
IPR001179DomainFKBP-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR028359FamilyUDP-N-acetyl-D-mannosamine/glucosamine dehydrogenaseInterproscan
IPR014026DomainUDP-glucose/GDP-mannose dehydrogenase, dimerisationInterproscan
IPR017476FamilyUDP-glucose/GDP-mannose dehydrogenaseInterproscan
IPR036220Homologous_superfamilyUDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamilyInterproscan
IPR008927Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR014027DomainUDP-glucose/GDP-mannose dehydrogenase, C-terminalInterproscan
IPR004104DomainGfo/Idh/MocA-like oxidoreductase, C-terminalInterproscan
IPR001732DomainUDP-glucose/GDP-mannose dehydrogenase, N-terminalInterproscan
IPR000683DomainGfo/Idh/MocA-like oxidoreductase, N-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR017850Homologous_superfamilyAlkaline-phosphatase-like, core domain superfamilyInterproscan
IPR002591FamilyType I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferaseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR039461FamilyPeptidase family M49Interproscan
IPR036671Homologous_superfamilyDPH-type metal-binding domain superfamilyInterproscan
IPR007872DomainDPH-type metal-binding domainInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR050305FamilySmall GTPase superfamily, RabInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002219DomainProtein kinase C-like, phorbol ester/diacylglycerol-binding domainInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR046349Homologous_superfamilyC1-like domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR018797FamilyFAM98Interproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR036716Homologous_superfamilyPesticidal crystal protein, N-terminal domain superfamilyInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR023313Active_siteUbiquitin-conjugating enzyme, active siteInterproscan
IPR050113FamilyUbiquitin-conjugating enzymeInterproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan
PTHR43491UDP-N-ACETYL-D-MANNOSAMINE DEHYDROGENASEInterproscan
PTHR10151ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASEInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23422DIPEPTIDYL PEPTIDASE III-RELATEDInterproscan
PTHR21454DPH3 HOMOLOG-RELATEDInterproscan
PTHR47980LD44762PInterproscan
PTHR22968PROTEIN KINASE C, MUInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR24067UBIQUITIN-CONJUGATING ENZYME E2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0000271Biological Processpolysaccharide biosynthetic processInterproscan
GO:0016628Molecular Functionoxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptorInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008239Molecular Functiondipeptidyl-peptidase activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006904Biological Processvesicle docking involved in exocytosisInterproscan
GO:0008021Cellular Componentsynaptic vesicleInterproscan
GO:0009306Biological Processprotein secretionInterproscan
GO:0017157Biological Processregulation of exocytosisInterproscan
GO:0030140Cellular Componenttrans-Golgi network transport vesicleInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0043197Cellular Componentdendritic spineInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0048210Biological ProcessGolgi vesicle fusion to target membraneInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0072659Biological Processprotein localization to plasma membraneInterproscan
GO:0098969Biological Processneurotransmitter receptor transport to postsynaptic membraneInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0090729Molecular Functiontoxin activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061631Molecular Functionubiquitin conjugating enzyme activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07885RAB27A; Ras-related protein Rab-27A-Protein kinasesko01001deepkoala
Translation factorsko03012deepkoala
Ubiquitin systemko04121deepkoala
Peptidases and inhibitorsko01002deepkoala
GTP-binding proteinsko04031deepkoala

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